1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AATTAAAGAGAGAAAGGAATCGGTGGCAATACTCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTGgtatgtttaatatcatctacaacattttcccatttctggattaccgttttttgtaccatatcagcaatccagtaaatctgctatggtccatgcattgcct...
species | Zea mays |
transcript | GRMZM2G342327_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTG GGTAGTAGGTTGGGTATCACGACAGTAGTTTCTACTGATTCCATNCGACATEST: gi|30087892|gb|CB886097.1|CB886097
genomic: TCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTGgtatgtttaa ... tgttcaccagGGTAGTAGGTTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGACAT
EST: TCTTGAGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTG GGTAGTAGGTTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGACATEST: gi|32930223|gb|CF035035.1|CF035035
genomic: TCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTGgtatgtttaa ... tgttcaccagGGTAGTAGGTTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGACAT
EST: TCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTG GGTAGTAGGTTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGACATEST: gi|32934046|gb|CF038858.1|CF038858
genomic: TCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTGgtatgtttaa ... tgttcaccagGGTAGTAGGTTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGACAT
EST: TCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTG GGTAGTAGGTTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGACATEST: gi|32930712|gb|CF035524.1|CF035524
genomic: TCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTGgtatgtttaa ... tgttcaccagGGTAGTAGGTTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGACAT
EST: TCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTG GGTAGTAGGTTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGACATEST: gi|50339642|gb|CO534768.1|CO534768
genomic: TCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTGgtatgtttaa ... tgttcaccagGGTAGTAGGTTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGACAT
EST: TCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTG GGTAGTAGGTTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGACAT
genomic: TCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTGgtatgtttaa ... tgttcaccagGGTAGTAGGTTGGGTATCACGACAGTAGTTTCTACTGATTCCATACGACAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AATTAAAGAGAGAAAGGAATCGGTGGCAATACTCTTGTGTGGGACAAGTGGATGTGGCAAGTCCACTTTATCATCTTTGCTGgtatgtttaatatcatctacaacattttcccatttctggattaccgttttttgtaccatatcagcaatccagtaaatctgctatggtccatgcattgcct
- - - - - - - - - - - - - - - - - - - - - - - AGTGGA