1 5' 3' | 2 5' 3' | 3 5' 3' |
TTATTACTGTTGCCGCAAAACCACTTAATCCTGCCATGTTTGATGCTGTTCTCAGAAACTTTACACCAGATGTGCCGGCTGGAATAACTGCTCGGCCTAGgtaagtgcttgtggttctgttgtttggcatgtttttttcttgagtaaaactcctttaagttgtggattctgaatcaaatatagcaatttaggccattaag...
species | Zea mays |
transcript | GRMZM2G330690_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTCAGAAACTTTACACCAGATGTGCCGGCTGGAATAACTGCTCGGCCTAG GCCAGGAAGATGCTCAAGAGTTTTTAAGTTTTGCCATGGATAGAATGCATGEST: gi|26457414|gb|CA828997.1|CA828997
genomic: CTCAGAAACTTTACACCAGATGTGCCGGCTGGAATAACTGCTCGGCCTAGgtaagtgctt ... tgctctgcagGC-AGGAAGATGCTCAAGAGTTTTTAAGTTTTGCCATGGATAGAATGCATG
EST: CTCAGAAACTTTACACCAGATGTGCCGGCTGGAATAACTGCTCGGCCTAG GCAGGAAGATGCTCAAGAGTTTTTAAGTTTTGCCATGGATAGAATGCATGA
genomic: CTCAGAAACTTTACACCAGATGTGCCGGCTGGAATAACTGCTCGGCCTAGgtaagtgctt ... tgctctgcagGCAGGAAGATGCTCAAGAGTTTTTAAGTTTTGCCATGGATAGAATGCATGA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTATTACTGTTGCCGCAAAACCACTTAATCCTGCCATGTTTGATGCTGTTCTCAGAAACTTTACACCAGATGTGCCGGCTGGAATAACTGCTCGGCCTAGgtaagtgcttgtggttctgttgtttggcatgtttttttcttgagtaaaactcctttaagttgtggattctgaatcaaatatagcaatttaggccattaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gagtaaaa