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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GCAGTGCCCGAGGATAGTGTTGTTCAGGATTGGAAGGAGCAGCTGGGTGAGAAGCTTGCCAATCAGTTGACGACATGTGGCTATAAATCCAATCTTCGAGgtaaacgctgcaataattgctcaagtactgtcaaagggctaaacttgcacattttagttgggagtgatggggcagttgaataatggatacattgttagtt...

Basic information

species Zea mays
transcript GRMZM2G315931_T01
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G315931_T01 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os08g37950.1 (Oryza sativa), 5'ss of exon 3
GCAGTGCCCGAGGATAGTGTTGTTCAGGATTGGAAGGAGCAGCTGGGTGAGAAGCTTGCCAATCAGTTGACGACATGTGGCTATAAATCCAATCTTCGAGgtaaacgctgcaataatt-gctcaagtactgtcaaagggctaaacttgcacat-tttagttgggagtga--tggggcagttgaataatggatacattgttagtt-------------------------------------------------------------------------------------------
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GCGGTGCCAGAAGATGAAGATGCGAAAAACTGGAAGCTGCAGTTGGGTGAGAAGCTTGCCAACCAGTTGACAACATGTGGTTACAAATCCAACCTTCGAGgtatacattgttataatttatgccataattgttgttgttcacattgtatatatacttacgtacaaatgagatgatgtatttctctgcttctgctttctttagtttaaatctgaaactcctctccccaaaataaataaataaataaatgcatcgccattattttcagtctaatgcaaatgactattgcacctgcag