1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' | 11 5' 3' | 12 5' 3' | 13 5' 3' | 14 5' 3' | 15 5' 3' | 16 5' 3' |
GATTAAGGACATGTACATGCACTTCAACAAGAGATCCGGGCTGATGGCCCCTCTTGTCGCTGAAGATGTTTATGAAATCATCATGAAGgtgagattctggttttcccctgacacatttctgacaggggcaactgtgtagacagtgctgatctgtttctggcggttgaatccactgttccattcgtttt...
species | Zea mays |
transcript | GRMZM2G304362_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GGCTGATGGCCCCTCTTGTCGCTGAAGATGTTTATGAAATCATCATGAAG AATGCTGCTCGCTTGGACAGTGAGATAATTTATGATAGGGATTTCGACTACEST: gi|31355936|gb|CD440293.1|CD440293
genomic: GGCTGATGGCCCCTCTTGTCGCTGAAGATGTTTATGAAATCATCATGAAGgtgagattct ... tacatttcagAATGCTGCTCGCTTGGACAGTGAGATAATTTATGATAGGGATTTCGACTAC
EST: GGCTGATGGCCCCTCTGGTCGCTGAAGATGTTTATGAAATCATCATGAAG AATGCTGCTCGCTTGGACAGTGAGATAATTTATGACAGGGATTTCAACTACEST: gi|32796379|gb|CD948615.1|CD948615
genomic: GGCTGATGGCCCCTCTTGTCGCTGAAGATGTTTATGAAATCATCATGAAGgtgagattct ... tacatttcagAATGCTGCTCGCTTGGACAGTGAGATAATTTATGATAGGGATTTCGACTAC
EST: GGCTGATGGCCCCTCTTGTCGCTGAAGATGTTTATGAAATCATCATGAAG AATGCTGCTCGCTTGGACAGTGAGATAATTTATGACAGGGATTTCGACTACEST: gi|32803077|gb|CD955313.1|CD955313
genomic: GGCTGATGGCCCCTCTTGTCGCTGAAGATGTTTATGAAATCATCATGAAGgtgagattct ... tacatttcagAATGCTGCTCGCTTGGACAGTGAGATAATTTATGATAGGGATTTCGACTAC
EST: GGCTGATGGCCCCTCTTGTCGCTGAAGATGTTTATGAAATCATCATGAAG AATGCTGCTCGCTTGGACAGTGAGATAATTTATGACAGGGATTTCGACTACEST: gi|88756462|gb|DY540603.1|DY540603
genomic: GGCTGATGGCCCCTCTTGTCGCTGAAGATGTTTATGAAATCATCATGAAGgtgagattct ... tacatttcagAATGCTGCTCGCTTGGACAGTGAGATAATTTATGATAGGGATTTCGACTAC
EST: GGCTGATGGCCCCTCTTGTCGCTGAAGATGTTTATGAAATCATCATGAAG AATGCTGCTCGCCTGGACAGTGAGATAATTTATGATAGGGATTTCGACTACEST: gi|31355336|gb|CD439693.1|CD439693
genomic: GGCTGATGGCCCCTCTTGTCGCTGAAGATGTTTATGAAATCATCATGAAGgtgagattct ... tacatttcagAATGCTGCTCGCTTGGACAGTGAGATAATTTATGATAGGGATTTCGACTAC
EST: GGCTGATGGCCCCTCTGGTCGCTGAAGATGTTTATGAAATCATCATGAAG AATGCTGCTCGCTTGGACAGTGAGATAATTTATGACAGGGATTTCGACTAC
genomic: GGCTGATGGCCCCTCTTGTCGCTGAAGATGTTTATGAAATCATCATGAAGgtgagattct ... tacatttcagAATGCTGCTCGCTTGGACAGTGAGATAATTTATGATAGGGATTTCGACTAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GATTAAGGACATGTACATGCACTTCAACAAGAGATCCGGGCTGATGGCCCCTCTTGTCGCTGAAGATGTTTATGAAATCATCATGAAGgtgagattctggttttcccctgacacatttctgacaggggcaactgtgtagacagtgctgatctgtttctggcggttgaatccactgttccattcgtttt
- - - - - - - - - - - - - - - - - - - GCTGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG