1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CATCAGTGGACTTAACAACCTTTCAAGTACGTCGAACTTACTAGATCCTTGTGCTATGGCTGCAGTCAAGCAAAAAGGCTGTTTCTGACGCATGCTTCAGgtaacgctgaaaccgtgttctcgggaagaacctggtcagttttggttgtgcttagtaacatgaaacccctgaaggctgaagctagctggggctggtttcccacctcttgcattgcag
species | Zea mays |
transcript | GRMZM2G180155_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTGCTATGGCTGCAGTCAAGCAAAAAGGCTGTTTCTGACGCATGCTTCAG CAAGCAGCAGTCGGTGATCCAGCAGCTCCTCTCGCGCAEST: gi|13381721|gb|BG458276.1|BG458276
genomic: GTGCTATGGCTGCAGTCAAGCAAAAAGGCTGTTTCTGACGCATGCTTCAGgtaacgctga ... tgcattgcagCAAGCAGCAGTCGGTGATCCAGCAGCTCCTCTCGCGCA
EST: GTGCTATGGCTGCAGTCAAGCAAAAAGGCTGTTTCTGACGCATGCTTCAG CAAGCAGCAGTCGGTGATCCAGCAGCTCCTCTCGCGCAAGGGGACGCCGCC
genomic: GTGCTATGGCTGCAGTCAAGCAAAAAGGCTGTTTCTGACGCATGCTTCAGgtaacgctga ... tgcattgcagCAAGCAGCAGTCGGTGATCCAGCAGCTCCTCTCGCGCAAGGGGACGCCGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATCAGTGGACTTAACAACCTTTCAAGTACGTCGAACTTACTAGATCCTTGTGCTATGGCTGCAGTCAAGCAAAAAGGCTGTTTCTGACGCATGCTTCAGgtaacgctgaaaccgtgttctcgggaagaacctggtcagttttggttgtgcttagtaacatgaaacccctgaaggctgaagctagctggggctggtttcccacctcttgcattgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT