1 5' 3' | 2 5' 3' | 3 5' 3' |
GAAGATAAACATCTTGTATATCCGAAGGAGTGGCAGATGACAGAAAACCTGGATGTGTTAATTCCTCTCTGAGCCAGAACAGAGGCATACCGCCCTGCAGgtaaaagcttgatcatcttttgcaattgtttctcaataatgatgtaaatagcatcgtttttatgtaatttatgttcatacattttcttatatcttggtca...
species | Zea mays |
transcript | GRMZM2G179504_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GGATGTGTTAATTCCTTTTTGAGCCAGAACAGAGGCATACCGCCCTGCAG CTTCAGCAATCGAGCACATGGAGACGCGGCCGAGCATGACGTGCGTGTGTGEST: gi|86470488|gb|DY236858.1|DY236858
genomic: GGATGTGTTAATTCCTCTCTGAGCCAGAACAGAGGCATACCGCCCTGCAGgtaaaagctt ... gttcctccagCTTCAGCAATCGAGCACATGGAGACGCGGCCGAGCATGACGTGCGTGTGTG
EST: GGATGTGTTAATTCCTTTTTGAGCCAGAACAGAGGCATACCGCCCTGCAG CTTCAGCAATCGAGCACATGGAGACGCGGCCGAGCATGACGTGCGTGTGTGEST: gi|166580788|gb|EG166433.1|EG166433
genomic: GGATGTGTTAATTCCTCTCTGAGCCAGAACAGAGGCATACCGCCCTGCAGgtaaaagctt ... gttcctccagCTTCAGCAATCGAGCACATGGAGACGCGGCCGAGCATGACGTGCGTGTGTG
EST: CAGAACAGGGGCATACCGCCCTGCAG CTTCAGCAATCGAGCACATGGAGACGCGGCCGAGCATGACGTGCGTGTGTG
genomic: CAGAACAGAGGCATACCGCCCTGCAGgtaaaagctt ... gttcctccagCTTCAGCAATCGAGCACATGGAGACGCGGCCGAGCATGACGTGCGTGTGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGATAAACATCTTGTATATCCGAAGGAGTGGCAGATGACAGAAAACCTGGATGTGTTAATTCCTCTCTGAGCCAGAACAGAGGCATACCGCCCTGCAGgtaaaagcttgatcatcttttgcaattgtttctcaataatgatgtaaatagcatcgtttttatgtaatttatgttcatacattttcttatatcttggtca
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG