1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GTAAACAAGCCTTTTGCTTTTCCTTGTTTTGGAGTTTCCAAAAAGGAGAAATATTGGATCCTCCCTTCAATTTCCGATGTTGTTGTTGAGCAAGgtaagaccgatgctatgctgaagaaacgtgtcagtgatgggtcatgaaaaatatcatacgctttcaactcacattttgcatgaattgatgccggaaacca...
species | Zea mays |
transcript | GRMZM2G179281_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GGAGAAATATTGGATCCTCCCTTCAATTTCCGATGTTGTTGTTGAGCAAG ATTATCTCCAATCCATTTTTGGTGTATATTCGATCAGGATTGAGAATATTAEST: gi|50324484|gb|CO519610.1|CO519610
genomic: GGAGAAATATTGGATCCTCCCTTCAATTTCCGATGTTGTTGTTGAGCAAGgtaagaccga ... atttctgtagATTATCTCCAATCCATTTTTGGTGTATATTCGATCAGGATTGAGAATATTA
EST: GGAGAAATATTGGATCCTCCCTTCAATTTCCGATGTTGTTGTTGAGCAAG ATTATCTCCAATCCATTTTTGGTGTATATTCGATCAGGATTGAGAATATTAEST: gi|32919451|gb|CF024263.1|CF024263
genomic: GGAGAAATATTGGATCCTCCCTTCAATTTCCGATGTTGTTGTTGAGCAAGgtaagaccga ... atttctgtagATTATCTCCAATCCATTTTTGGTGTATATTCGATCAGGATTGAGAATATTA
EST: GGAGAAATATTGGATCCTCCCTTCAATTTCCGATGTTGTTGTTGAGCAAG ATTATCTCCAATCCATTTTTGGTGTATATTCGATCAGGATTGAGAATATTAEST: gi|71772785|gb|DR970710.1|DR970710
genomic: GGAGAAATATTGGATCCTCCCTTCAATTTCCGATGTTGTTGTTGAGCAAGgtaagaccga ... atttctgtagATTATCTCCAATCCATTTTTGGTGTATATTCGATCAGGATTGAGAATATTA
EST: GGAGAAATATTGGATCCTCCCTTCAATTTCCGATGTTGTTGTTGAGCAAG ATTATCTCCAATCCATTTTTGGTGTATATTCGATCAGGATTGAGAATATTAEST: gi|50324921|gb|CO520047.1|CO520047
genomic: GGAGAAATATTGGATCCTCCCTTCAATTTCCGATGTTGTTGTTGAGCAAGgtaagaccga ... atttctgtagATTATCTCCAATCCATTTTTGGTGTATATTCGATCAGGATTGAGAATATTA
EST: GGAGAAATATTGGATCCTCCCTTCAATTTCCGATGTTGTTGTTGAGCAAG ATTATCTCCAATCCATTTTTGGTGTATATTCGATCAGGATTGAGAATATTA
genomic: GGAGAAATATTGGATCCTCCCTTCAATTTCCGATGTTGTTGTTGAGCAAGgtaagaccga ... atttctgtagATTATCTCCAATCCATTTTTGGTGTATATTCGATCAGGATTGAGAATATTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GTAAACAAGCCTTTTGCTTTTCCTTGTTTTGGAGTTTCCAAAAAGGAGAAATATTGGATCCTCCCTTCAATTTCCGATGTTGTTGTTGAGCAAGgtaagaccgatgctatgctgaagaaacgtgtcagtgatgggtcatgaaaaatatcatacgctttcaactcacattttgcatgaattgatgccggaaacca
- - - - - - - - - - - - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaagaaac
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -atgaaaaa