Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatgaacctcatatagtggacctcttcagcaaagttgtgctttattcatctatattctagatgaagataatagtgacaattaattgatgctttgttattcttttttag

Basic information

species Zea mays
transcript GRMZM2G168330_T02
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G168330_T02 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os02g40880.1 (Oryza sativa), 5'ss of exon 3
TGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatgaacctcatatagtggacctcttcagcaaagttgtgctt-tattcatctatattctagatgaagataatagtgacaattaattgatgctttgttattcttttttag
|||||||| ||||||||  |||| || || |||||||||||||||||||||||||| || || |||||| ||||  |||| |||||||||||||| |||||| |  |||||  |  |       | |   ||||||    | |  || | | ||| | || |||   ||  | | ||  |   | ||||                         
TGCCAGATCAACTTCAAGAGGCTTTCCCTGACTGACATCAAGATTGACATCAAACGTGTCCCGAAGAAGACAACTTTGATTAAGGCTATGGAGGAGGCTGgttagtatgaatgttgtgctaccaatcctatcagcagttatttatttctgtccatgtctaatctgagtggtggttattct---atttaag------------------------

upper sequence: GRMZM2G168330_T02 (Zea mays), 5'ss of exon 3
lower sequence: GLYMA10G32580.1 (Glycine max), 5'ss of exon 3
TGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatgaacctcatatagtggacctcttcagcaaagttgtgctttattcatctatattctagatgaagataatagtgacaattaattgatgctttgttattcttttttag
| |||  | || |||||| |||| || ||||| ||||||||||||||||||||  | || || ||||||  |   ||  |||| || |||||||| |||||||  | ||    || |  |   |   |  | |      ||| |  || ||    |||| |  | |  ||  |  |  ||  | ||  || |||    |              
TCCCAAGTCAATTTCAAAAGGCTTTCCCTTACCGACATCAAGATTGACATCAAGAGGGTCCCTAAGAAGAAAGATCTTGTCAAAGCCATGGAGGATGCTGgtag-ggtgcttttctttcaagtgttattatgactcttattg-gtattgtttggttataattgaaaataatttgtttatgctacttg-ttaatgaacag--------------
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211359619|gb|FK995532.1|FK995532
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|78025604|gb|DV493991.1|DV493991
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211080917|gb|FK995370.1|FK995370
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211356966|gb|FK995522.1|FK995522
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211069962|gb|FK995312.1|FK995312
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|9255102|gb|BE345570.1|BE345570
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211362282|gb|FK995547.1|FK995547
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAG
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAG
EST: gi|29130664|gb|CB381368.1|CB381368
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211067220|gb|FK995294.1|FK995294
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211210863|gb|FK995469.1|FK995469
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAKTGGGAAAACAGCTCATGGGGCAAKAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|18654747|gb|BM499552.1|BM499552
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|29945946|gb|CB815900.1|CB815900
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211083655|gb|FK995389.1|FK995389
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60341766|gb|DN208739.1|DN208739
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211200582|gb|FK995414.1|FK995414
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|18649028|gb|BM497847.1|BM497847
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|30031553|gb|CB833404.1|CB833404
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|120480700|gb|EH210966.1|EH210966
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211213430|gb|FK995481.1|FK995481
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAGGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|120480782|gb|EH211015.1|EH211015
EST:     CAWACGCGTTCCCAASAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGA
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGA
EST: gi|60395137|gb|DN228006.1|DN228006
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211210869|gb|FK995475.1|FK995475
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|4885817|gb|AI676937.1|AI676937
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|5439488|gb|AI820409.1|AI820409
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|67020174|gb|CO448923.1|CO448923
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|18649196|gb|BM498030.1|BM498030
EST:     CCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211362278|gb|FK995543.1|FK995543
EST:     CAAACGCGTTCCCNAGAAGTCAACCCTGATCNAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAG
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAG
EST: gi|211083641|gb|FK995375.1|FK995375
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|18649755|gb|BM498574.1|BM498574
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211200573|gb|FK995405.1|FK995405
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|20506726|gb|BQ279317.1|BQ279317
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|29945948|gb|CB815901.1|CB815901
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|18166196|gb|BM336035.1|BM336035
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211078178|gb|FK995352.1|FK995352
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211197713|gb|FL091650.1|FL091650
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGACAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211078176|gb|FK995350.1|FK995350
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60338249|gb|DN205222.1|DN205222
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211478439|gb|FL475437.1|FL475437
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211078184|gb|FK995358.1|FK995358
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211208303|gb|FK995460.1|FK995460
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|8665654|gb|BE186470.1|BE186470
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|9255101|gb|BE345569.1|BE345569
EST:     CAAACGCGTTTCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211075431|gb|FK995330.1|FK995330
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGG-AAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211362275|gb|FK995540.1|FK995540
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|29130747|gb|CB381451.1|CB381451
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211198038|gb|FK995403.1|FK995403
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|30031552|gb|CB833403.1|CB833403
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|5456090|gb|AI833780.1|AI833780
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211197710|gb|FL091647.1|FL091647
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAANACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|32912785|gb|CF017597.1|CF017597
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211072702|gb|FK995327.1|FK995327
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60358103|gb|DN225076.1|DN225076
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211378851|gb|FL249885.1|FL249885
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211192906|gb|FL091622.1|FL091622
EST:     CAAACGCGTTCCCAAGAAGTCMACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGMAGACGMAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|18654746|gb|BM499551.1|BM499551
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211067215|gb|FK995289.1|FK995289
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|30052160|gb|AI065449.2|AI065449
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|32851036|gb|CD990717.1|CD990717
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|9743082|gb|BE519230.1|BE519230
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211213431|gb|FK995482.1|FK995482
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211359613|gb|FK995526.1|FK995526
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211203138|gb|FK995424.1|FK995424
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211359624|gb|FK995537.1|FK995537
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60393992|gb|DN226862.1|DN226862
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211072692|gb|FK995317.1|FK995317
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211072704|gb|FK995329.1|FK995329
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|18661729|gb|BM501549.1|BM501549
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|9743083|gb|BE519231.1|BE519231
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211359612|gb|FK995525.1|FK995525
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAGGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211072698|gb|FK995323.1|FK995323
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|9028642|gb|BE238682.1|BE238682
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211195304|gb|FL091632.1|FL091632
EST:     AAACGCGTTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAAGCTGATTGT
genomic: AAACGCGTT-CCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTG-AAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAA-GCTGATTGT
EST: gi|211198032|gb|FK995397.1|FK995397
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|31997798|gb|CD661777.1|CD661777
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211205720|gb|FK995443.1|FK995443
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211356962|gb|FK995518.1|FK995518
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211195306|gb|FL091634.1|FL091634
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCA
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCA
EST: gi|33102511|gb|CF062471.1|CF062471
EST:     TTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: TTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60350453|gb|DN217426.1|DN217426
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|15209034|gb|BI430918.1|BI430918
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211210865|gb|FK995471.1|FK995471
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211208307|gb|FK995464.1|FK995464
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211205717|gb|FK995440.1|FK995440
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|5108454|gb|AI740167.1|AI740167
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60338970|gb|DN205943.1|DN205943
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211210864|gb|FK995470.1|FK995470
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211203139|gb|FK995425.1|FK995425
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGMAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211069961|gb|FK995311.1|FK995311
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAAGCTGATTGTC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAA-GCTGATTGTC
EST: gi|211213437|gb|FK995488.1|FK995488
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|149038559|gb|EE155486.2|EE155486
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60398623|gb|DN231439.1|DN231439
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211078173|gb|FK995347.1|FK995347
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAA-TGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTC-
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60343605|gb|DN210578.1|DN210578
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211075439|gb|FK995338.1|FK995338
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211208295|gb|FK995452.1|FK995452
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|5455957|gb|AI833647.1|AI833647
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|29947552|gb|CB816716.1|CB816716
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60351224|gb|DN218197.1|DN218197
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211356954|gb|FK995510.1|FK995510
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211195300|gb|FL091628.1|FL091628
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211213442|gb|FK995493.1|FK995493
EST:     CAAACGCGTTCCCAAGAGGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTATTTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211198025|gb|FK995390.1|FK995390
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211083651|gb|FK995385.1|FK995385
EST:     CAAACGTGTCCCCAAGAAGTCAACCTTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACTAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|29577132|gb|CB617244.1|CB617244
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|15313730|gb|BI478928.1|BI478928
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211205715|gb|FK995438.1|FK995438
EST:     CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTG                         ATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1163

TGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCCAGAAGAGGAGGGCTGCGCTCAGTGACTTTGACAGGTTCAAGGTCATGCT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 897

TGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCCAGAAGAGGAGGGCTGCGCTCAGTGACTTTGACAGGTTCAAGGTCATGCT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 805

TGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCCAGAAGAGGAGGGCTGCGCTCAGTGACTTTGACAGGTTCAAGGTCATGCT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 696

TGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatga ... tcttttttagATGTGAAGACGAAGTGGGAAAACAGCTCATGGGGCAAGAAGCTGATTGTCCAGAAGAGGAGGGCTGCGCTCAGTGACTTTGACAGGTTCAAGGTCATGCT


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
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TGCCAGATTAACTTCAAACGGCTCTCACTTACTGACATCAAGATTGACATCAAACGCGTTCCCAAGAAGTCAACCCTGATCAAGGCTATGGAGGAAGCTGgtaatgatgaacctcatatagtggacctcttcagcaaagttgtgctttattcatctatattctagatgaagataatagtgacaattaattgatgctttgttattcttttttag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGAAGT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG