1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
GGAGGAGTTCAGGAAGGACTACAAGGAGAAGCACCCCAATGTGAAACAAGTCTCAGTGgtaagtgttgtttcatccatcattccttcattgtttcgaatgttagtgatgcatgactccttcattggatttgaatgttcgtgatttgctgacatgaaacttccgtttctgatgtttgttactttgtggatgtcag
species | Zea mays |
transcript | GRMZM2G162284_T03 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TCAGGAAGGACTACAAGGAGAAGCACCCCAATGTGAAACAAGTCTCAGTG ATTGGCAAGGCTGGTGGTGACATGTGGAAGTCCTTEST: gi|31364629|gb|CD448984.1|CD448984
genomic: TCAGGAAGGACTACAAGGAGAAGCACCCCAATGTGAAACAAGTCTCAGTGgtaagtgttg ... tggatgtcagATTGGCAAGGCTGGTGGTGACATGTGGAAGTCCTT
EST: TCAGGAAGGACTACAAGGAGAAGCACCCCAATGTGAAACAAGTCTCAGTG ATTGGCAAGGCTGGTGGTGACATGTGGAAGTCCTTGTCTGATGCCEST: gi|31364137|gb|CD448492.1|CD448492
genomic: TCAGGAAGGACTACAAGGAGAAGCACCCCAATGTGAAACAAGTCTCAGTGgtaagtgttg ... tggatgtcagATTGGCAAGGCTGGTGGTGACATGTGGAAGTCCTTGTCTGATGCC
EST: TCAGGAAGGACTACAAGGAGAAGCACCCCAATGTGAAACAAGTCTCAGTG ATTGGCAAGGCTGGTGGTGACATGTGGAAGTCCTTGTCTGATGCC
genomic: TCAGGAAGGACTACAAGGAGAAGCACCCCAATGTGAAACAAGTCTCAGTGgtaagtgttg ... tggatgtcagATTGGCAAGGCTGGTGGTGACATGTGGAAGTCCTTGTCTGATGCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAGGAGTTCAGGAAGGACTACAAGGAGAAGCACCCCAATGTGAAACAAGTCTCAGTGgtaagtgttgtttcatccatcattccttcattgtttcgaatgttagtgatgcatgactccttcattggatttgaatgttcgtgatttgctgacatgaaacttccgtttctgatgtttgttactttgtggatgtcag
- - - - - - - - - - - AAGGAG
- - - - - - - - - - - AGGAGA
- - - - - - - - - - - - GGAGAA
- - - - - - - - - - - - - AGAAGC