1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGGAAACAACTTCAAGCGGCGGATGGCTTTGAGGCGAACATGGATGCAATATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTTgtaagttcactttatttgccctcaagtacattgcaatgtttccatttgtgtctttcgaaccagtttctttttggttgagacaccctattggattggtaaa...
species | Zea mays |
transcript | GRMZM2G160958_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTT CACAAGAATGAGCAAGTCAATATGGAGTTATGGAGAGAGGCTCAATTATATEST: gi|61119151|gb|DN560112.1|DN560112
genomic: ATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTTgtaagttcac ... taaaatgcagCACAAGAATGAGCAAGTCAATATGGAGTTATGGAGAGAGGCTCAATTATAT
EST: ATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTT CACAAGAATGAGCAAGTCAATATGGAGTTATGGAGAGAGGCTCAATTATATEST: gi|22546267|gb|BU098578.1|BU098578
genomic: ATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTTgtaagttcac ... taaaatgcagCACAAGAATGAGCAAGTCAATATGGAGTTATGGAGAGAGGCTCAATTATAT
EST: ATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTT CACAAGAATGAGCAAGTCAATATGGAGTTATGGAGAGAGGCTCAATTATATEST: gi|20301227|gb|BQ164170.1|BQ164170
genomic: ATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTTgtaagttcac ... taaaatgcagCACAAGAATGAGCAAGTCAATATGGAGTTATGGAGAGAGGCTCAATTATAT
EST: ATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTT CACAAGAATGAGCAAGTCAATATGGAGTTATGGAGAGAGGCTCAATTATATEST: gi|32912724|gb|CF017536.1|CF017536
genomic: ATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTTgtaagttcac ... taaaatgcagCACAAGAATGAGCAAGTCAATATGGAGTTATGGAGAGAGGCTCAATTATAT
EST: ATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTT CACAAGAATGAGCAAGTCAATATGGAGTTATGGAGAGAGGCTCAATTATATEST: gi|26558871|gb|CA831106.1|CA831106
genomic: ATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTTgtaagttcac ... taaaatgcagCACAAGAATGAGCAAGTCAATATGGAGTTATGGAGAGAGGCTCAATTATAT
EST: ATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTT CACAAGAATGAGCAAGTCAATATGGAGTTATGGAGAGAGGCTCAATTATAT
genomic: ATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTTgtaagttcac ... taaaatgcagCACAAGAATGAGCAAGTCAATATGGAGTTATGGAGAGAGGCTCAATTATAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGAAACAACTTCAAGCGGCGGATGGCTTTGAGGCGAACATGGATGCAATATGAGGCTGTTCGCTCAGGCGATGTAGTAGTCCGTTTTTTCACTGGTCTTgtaagttcactttatttgccctcaagtacattgcaatgtttccatttgtgtctttcgaaccagtttctttttggttgagacaccctattggattggtaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT