1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' | 10 5' 3' |
GAGGAGCTCCATAGGCGGTTAGCACCATCGAGTGCTACTCAGCATGATGGAAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATGgtaagttgggctctgctattaattttttttaatcaactgcttatggtaaaagggcactaatatatttgtgtaatgttcatttggttacattgtttggcat...
species | Zea mays |
transcript | GRMZM2G159295_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATG AATCTCCTTTTGAGTTCCGTGCATTGGAGGTTACTCTGGAAGCAATCTGCAEST: gi|149107575|gb|EE189457.2|EE189457
genomic: AAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATGgtaagttggg ... aacttcacagAATCTCCTTTTGAGTTCCGTGCATTGGAGGTTACTCTGGAAGCAATCTGCA
EST: AAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATG AATCTCCTTTTGAGTTCCGTGCATTGGAGGTTACTCTGGAAGCAATCTGCAEST: gi|26557372|gb|CA829607.1|CA829607
genomic: AAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATGgtaagttggg ... aacttcacagAATCTCCTTTTGAGTTCCGTGCATTGGAGGTTACTCTGGAAGCAATCTGCA
EST: AAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATG AATCTCCTTTTGAGTTCCGTGCATTGGAGGTTACTCTGGAAGCAATCTGCAEST: gi|32843159|gb|CD982840.1|CD982840
genomic: AAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATGgtaagttggg ... aacttcacagAATCTCCTTTTGAGTTCCGTGCATTGGAGGTTACTCTGGAAGCAATCTGCA
EST: AAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATG AATCTCCTTTTGAGTTCCGTGCATTGGAGGTTACTCTGGAAGCAATCTGCAEST: gi|29544404|gb|CB604784.1|CB604784
genomic: AAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATGgtaagttggg ... aacttcacagAATCTCCTTTTGAGTTCCGTGCATTGGAGGTTACTCTGGAAGCAATCTGCA
EST: AAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATG AATCTCCTTTTGAGTTCCGTGCATTGGAGGTTACTCTGGAAGCAATCTGCAEST: gi|32836386|gb|CD976064.1|CD976064
genomic: AAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATGgtaagttggg ... aacttcacagAATCTCCTTTTGAGTTCCGTGCATTGGAGGTTACTCTGGAAGCAATCTGCA
EST: AAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATG AATCTCCTTTTGAGTTCCGTGCATTGGAGGTTACTCTGGAAGCAATCTGCA
genomic: AAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATGgtaagttggg ... aacttcacagAATCTCCTTTTGAGTTCCGTGCATTGGAGGTTACTCTGGAAGCAATCTGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAGGAGCTCCATAGGCGGTTAGCACCATCGAGTGCTACTCAGCATGATGGAAAAGAGAACTTAAGTGGCCAGCATGATGTAGAAGGGGCAGAAGAAGATGgtaagttgggctctgctattaattttttttaatcaactgcttatggtaaaagggcactaatatatttgtgtaatgttcatttggttacattgtttggcat
- - - - - - - - - - - - - - - - - - - - - - - - - - AAGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGATG