1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGATTGTGCAAACCAGATACTCAAGGCGGCCATGGCGATTAACAGCGATGTGCTCGCCGAGATGGAAATCCCCGAAGTGTACCTGGAGACACTGCCCAAGgtaaaacaattacagctagggattcactgctaccagctctatctcttggaatccatgtcgtgtgcttgcttgctacattgtacttcaatccctggtaaag...
species | Zea mays |
transcript | GRMZM2G158679_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGCTCGCCGAGATGGAAATCCCCGAAGTGTACCTGGAGACACTGCCCAAG AACGGTAAATCTTGCTTGGGTGAGATAATTTATCGATACATAACAGCTGAGEST: gi|50329989|gb|CO525115.1|CO525115
genomic: TGCTCGCCGAGATGGAAATCCCCGAAGTGTACCTGGAGACACTGCCCAAGgtaaaacaat ... ttttctgcagAACGGTAAATCTTGCTTGGGTGAGATAATTTATCGATACATAACAGCTGAG
EST: TGCTCGCCGAGATGGAAATCCCCGAAGTGTACCTGGAGACACTGCCCAAG AACGGTAAATCTTGCTTGGGTGAGATAATTTATCGATACATAACAGCTGAG
genomic: TGCTCGCCGAGATGGAAATCCCCGAAGTGTACCTGGAGACACTGCCCAAGgtaaaacaat ... ttttctgcagAACGGTAAATCTTGCTTGGGTGAGATAATTTATCGATACATAACAGCTGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGATTGTGCAAACCAGATACTCAAGGCGGCCATGGCGATTAACAGCGATGTGCTCGCCGAGATGGAAATCCCCGAAGTGTACCTGGAGACACTGCCCAAGgtaaaacaattacagctagggattcactgctaccagctctatctcttggaatccatgtcgtgtgcttgcttgctacattgtacttcaatccctggtaaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA