1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
GAAAGGATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTGgtactccttgcctaaagcccaactgatcaatttgactgtcgtagcagttttctcagcgatataactactggattaacccatgtgactgagttctaatttcttttag
species | Zea mays |
transcript | GRMZM2G156158_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTG CTTCCAGCCATCGAAGTTCTCTCTGCATTACCTCGTTCAACTTCTATAAATEST: gi|149109358|gb|EE190158.2|EE190158
genomic: ATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTGgtactccttg ... tttcttttagCTTCCAGCCATCGAAGTTCTCTCTGCATTACCTCGTTCAACTTCTATAAAT
EST: ATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTG CTTCCAGCCATCGAAGTTCTCTCTGCATTACCTCGTTCCACTTCTATAAATEST: gi|76289610|gb|DV029178.1|DV029178
genomic: ATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTGgtactccttg ... tttcttttagCTTCCAGCCATCGAAGTTCTCTCTGCATTACCTCGTTCAACTTCTATAAAT
EST: ATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTG CTTCCAGCCATCGAAGTTCTCTCTGCATTACCTCGTTCAACTTCTATAAATEST: gi|211328611|gb|FK972862.1|FK972862
genomic: ATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTGgtactccttg ... tttcttttagCTTCCAGCCATCGAAGTTCTCTCTGCATTACCTCGTTCAACTTCTATAAAT
EST: ATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTG CTTCCAGCCATCGAAGTTCTCTCTGCATTACCTCGTTCAACTTCTATAAATEST: gi|149103306|gb|EE288682.2|EE288682
genomic: ATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTGgtactccttg ... tttcttttagCTTCCAGCCATCGAAGTTCTCTCTGCATTACCTCGTTCAACTTCTATAAAT
EST: ATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTG CTTCCAGCCATCGAAGTTCTCTCTGCATTACCTCGTTCAACTTCTATAAATEST: gi|211328605|gb|FK972856.1|FK972856
genomic: ATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTGgtactccttg ... tttcttttagCTTCCAGCCATCGAAGTTCTCTCTGCATTACCTCGTTCAACTTCTATAAAT
EST: ATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTG CTTCCAGCCATCGAAGTTCTCTCTGCATTACCTCGTTCAACTTCTATAAAT
genomic: ATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTGgtactccttg ... tttcttttagCTTCCAGCCATCGAAGTTCTCTCTGCATTACCTCGTTCAACTTCTATAAAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAAGGATGTTCTTGCAAAAGCGAAGACAGGAACAGGGAAAACAGTTGCCTTTTTGgtactccttgcctaaagcccaactgatcaatttgactgtcgtagcagttttctcagcgatataactactggattaacccatgtgactgagttctaatttcttttag
- - - - - - - - - - CGAAGA