1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CCAACCTCCTCGGCGGAGGTGACCTGCAATGTTTGTTATGATGATGTGCCACCCTCGGCTGCCTCCGAGATGGATTGTGGCCATAGCTACTGCAATGATTgtgagtaatgtccgattaggttgtctcagatgattccacattttcatcgtttgcatgttctagttaatagattttggtagagaaatggtgtaatgcattg...
species | Zea mays |
transcript | GRMZM2G153611_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACCCTCGGCTGCCTCCGAGATGGATTGTGGCCACAGCTACTGCAATGATT GTTGGACTGAATATTTCATTGTGAAAATAAATGAGGGTCAGAGCCGGCGTGEST: gi|18963962|gb|BM660728.1|BM660728
genomic: ACCCTCGGCTGCCTCCGAGATGGATTGTGGCCATAGCTACTGCAATGATTgtgagtaatg ... cctcacctagGTTGGACTGAATATTTCATTGTGAAAATAAATGAGGGTCAGAGCCGGCGTG
EST: ACCCTCGGCTGCCTCCGAGATGGATTGTGGCCACAGCTACTGCAATGATT GTTGGACTGAATATTTCATTGTGAAAATAAATGAGGGTCAGAGCCGGCGTGEST: gi|18964982|gb|BM661322.1|BM661322
genomic: ACCCTCGGCTGCCTCCGAGATGGATTGTGGCCATAGCTACTGCAATGATTgtgagtaatg ... cctcacctagGTTGGACTGAATATTTCATTGTGAAAATAAATGAGGGTCAGAGCCGGCGTG
EST: ACCCTCGGCTGCCTCCGAGATGGATTGTGGCCACAGCTACTGCAATGATT GTTGGACTGAATATTTCATTGTGAAAATAAATGAGGGTCAGAGCCGGCGTGEST: gi|89106486|gb|DY576703.1|DY576703
genomic: ACCCTCGGCTGCCTCCGAGATGGATTGTGGCCATAGCTACTGCAATGATTgtgagtaatg ... cctcacctagGTTGGACTGAATATTTCATTGTGAAAATAAATGAGGGTCAGAGCCGGCGTG
EST: AGCTACTGCAATGATT GTTGGACTGAATATTTCATTGTGAAAATAAATGAGGGTCAGAGCCGGCGTG
genomic: AGCTACTGCAATGATTgtgagtaatg ... cctcacctagGTTGGACTGAATATTTCATTGTGAAAATAAATGAGGGTCAGAGCCGGCGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCAACCTCCTCGGCGGAGGTGACCTGCAATGTTTGTTATGATGATGTGCCACCCTCGGCTGCCTCCGAGATGGATTGTGGCCATAGCTACTGCAATGATTgtgagtaatgtccgattaggttgtctcagatgattccacattttcatcgtttgcatgttctagttaatagattttggtagagaaatggtgtaatgcattg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA