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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctagagcctcacaaaactagcaccatcttctggaattcctttctttatttgtagtaataactggataaatgtctgccaaacaaattgttggaaccctgtgcactttgcag

Basic information

species Zea mays
transcript GRMZM2G153268_T01
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32869149|gb|CF008831.1|CF008831
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|87154241|gb|DY399030.1|DY399030
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32906529|gb|CF011342.1|CF011342
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21331083|gb|BQ486464.1|BQ486464
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32868830|gb|CF008512.1|CF008512
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869962|gb|CF009644.1|CF009644
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869130|gb|CF008812.1|CF008812
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|26455055|gb|CA826638.1|CA826638
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32906145|gb|CF010958.1|CF010958
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32906711|gb|CF011524.1|CF011524
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21390364|gb|BQ528413.1|BQ528413
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21330643|gb|BQ486024.1|BQ486024
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32868902|gb|CF008584.1|CF008584
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32868798|gb|CF008480.1|CF008480
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869732|gb|CF009414.1|CF009414
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32906188|gb|CF011001.1|CF011001
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21330230|gb|BQ485611.1|BQ485611
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|22545300|gb|BU097659.1|BU097659
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|94476869|gb|EB705827.1|EB705827
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869347|gb|CF009029.1|CF009029
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32868820|gb|CF008502.1|CF008502
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21481463|gb|BQ578132.1|BQ578132
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21390720|gb|BQ528769.1|BQ528769
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869678|gb|CF009360.1|CF009360
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|6918832|gb|AW400362.1|AW400362
EST:     GGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|26455721|gb|CA827304.1|CA827304
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32906776|gb|CF011589.1|CF011589
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32906353|gb|CF011166.1|CF011166
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|91056696|gb|EB167114.1|EB167114
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869004|gb|CF008686.1|CF008686
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869935|gb|CF009617.1|CF009617
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21390974|gb|BQ529023.1|BQ529023
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|76284258|gb|DV023826.1|DV023826
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32906072|gb|CF010885.1|CF010885
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21330566|gb|BQ485947.1|BQ485947
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32871088|gb|CF010770.1|CF010770
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21331044|gb|BQ486425.1|BQ486425
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|22545271|gb|BU097644.1|BU097644
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32870933|gb|CF010615.1|CF010615
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869706|gb|CF009388.1|CF009388
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32870944|gb|CF010626.1|CF010626
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32870848|gb|CF010530.1|CF010530
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32870419|gb|CF010101.1|CF010101
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32868838|gb|CF008520.1|CF008520
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21329906|gb|BQ485287.1|BQ485287
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21480717|gb|BQ577386.1|BQ577386
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|7227421|gb|AW566062.1|AW566062
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCATCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32870261|gb|CF009943.1|CF009943
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|76282033|gb|DV021601.1|DV021601
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21390840|gb|BQ528889.1|BQ528889
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21390269|gb|BQ528318.1|BQ528318
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|26455136|gb|CA826719.1|CA826719
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTG
EST: gi|32869728|gb|CF009410.1|CF009410
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32870106|gb|CF009788.1|CF009788
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21390973|gb|BQ529022.1|BQ529022
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|22545379|gb|BU097738.1|BU097738
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21330198|gb|BQ485579.1|BQ485579
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32870141|gb|CF009823.1|CF009823
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21331059|gb|BQ486440.1|BQ486440
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21390394|gb|BQ528443.1|BQ528443
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21331166|gb|BQ486533.1|BQ486533
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|78107661|gb|DV526079.1|DV526079
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32868879|gb|CF008561.1|CF008561
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32868808|gb|CF008490.1|CF008490
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32906097|gb|CF010910.1|CF010910
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32906151|gb|CF010964.1|CF010964
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869561|gb|CF009243.1|CF009243
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|116828641|gb|EC859969.1|EC859969
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCATCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21330488|gb|BQ485869.1|BQ485869
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|37426500|gb|CF651005.1|CF651005
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869921|gb|CF009603.1|CF009603
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|116825115|gb|EC868813.1|EC868813
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21236524|gb|BQ441983.1|BQ441983
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869817|gb|CF009499.1|CF009499
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21480986|gb|BQ577669.1|BQ577669
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32871116|gb|CF010798.1|CF010798
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32906740|gb|CF011553.1|CF011553
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21330501|gb|BQ485882.1|BQ485882
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32868963|gb|CF008645.1|CF008645
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21481063|gb|BQ577746.1|BQ577746
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21330850|gb|BQ486231.1|BQ486231
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869103|gb|CF008785.1|CF008785
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21330823|gb|BQ486204.1|BQ486204
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32906542|gb|CF011355.1|CF011355
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21330444|gb|BQ485825.1|BQ485825
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|22545294|gb|BU097639.1|BU097639
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21390888|gb|BQ528937.1|BQ528937
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|87154644|gb|DY399433.1|DY399433
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21481497|gb|BQ578180.1|BQ578180
EST:     GTGTTTTTTCATCATTACTTGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCA-GACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|116825532|gb|EC869263.1|EC869263
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCCAGCTGTCGTCTGAATTTACTGGTACCCAAGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32906089|gb|CF010902.1|CF010902
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869933|gb|CF009615.1|CF009615
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|76018262|gb|DT945432.1|DT945432
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|32869627|gb|CF009309.1|CF009309
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21331042|gb|BQ486423.1|BQ486423
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
EST: gi|21330731|gb|BQ486112.1|BQ486112
EST:     GTGGCAAGTCATCAGACAAGGGTGAACTG                         ACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG
genomic: GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 1 RNA-Seqlibrary.


Block sizes: 29 (upstream exon), 48 (downstream exon)
Score: 309

GTGGCAAGTCATCAGACAAGGGTGAACTGgtacagctag ... cactttgcagACAAGGGCCCCAAGCAAGCTGTCGTCTGCATTTTCTGGTACCCAGGATAAGTGCGCAGCATGCCAGAAAACAGTGTACCCGCTGGAGAAG




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