1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
CGCCACAGCCCCGGGAATGGCGAAGCACGCTGGAGCATACTGGTTTGGAAGTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAGgttagcatattccgtactcctgcactgaatctgatgataaaagtattcagcatgatcttaatggaaaatgaaaaaaacatggtcatctgcacatgtcaga...
species | Zea mays |
transcript | GRMZM2G147849_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAG GTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAAEST: gi|160481653|gb|EY254223.1|EY254223
genomic: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAGgttagcatat ... tctatcccagGTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAA
EST: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAG GTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAAEST: gi|211308480|gb|FL124618.1|FL124618
genomic: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAGgttagcatat ... tctatcccagGTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAA
EST: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAG GTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAAEST: gi|74239514|gb|DT647428.1|DT647428
genomic: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAGgttagcatat ... tctatcccagGTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAA
EST: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAG GTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAAEST: gi|211467558|gb|FL331131.1|FL331131
genomic: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAGgttagcatat ... tctatcccagGTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAA
EST: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAG GTTCTTCTCAGCAGGCTGCGACTCTTCCTAAGTCCATGGTACCCTTACGAAEST: gi|211279182|gb|FL307694.1|FL307694
genomic: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAGgttagcatat ... tctatcccagGTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAA
EST: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAG GTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAAEST: gi|211532037|gb|FL347050.1|FL347050
genomic: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAGgttagcatat ... tctatcccagGTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAA
EST: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAG GTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAA
genomic: GTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAGgttagcatat ... tctatcccagGTTCTTCTCAGCAGGTTGCGACTCTTCCTAAGTCCAGGGTACCCTTACGAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CGCCACAGCCCCGGGAATGGCGAAGCACGCTGGAGCATACTGGTTTGGAAGTCCAAACTACGGAGTGTTTACCTGGGATGACAAACTTCCAGGAGCTCAGgttagcatattccgtactcctgcactgaatctgatgataaaagtattcagcatgatcttaatggaaaatgaaaaaaacatggtcatctgcacatgtcaga
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gataaaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - atggaaaa
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaaaaaa