1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGTCGGCTGGAGAAAGGGCAGTATTTCCCAGTGACAGCAGTCCAACGCTTCGATGCTGCGgtgagctgagcttatcatggcaacccctctatgaatatatgatatgcttgttctgatcagtggtacctgaacaatctagtacttgagtttctatgcatgc...
species | Zea mays |
transcript | GRMZM2G140782_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGAAAGGGCAGTATTTCCCAGTGACAGCAGTCCAACGCTTCGATGCTGCG GGCAAACGCATCGAGAATGGCATATATTTGGGCCCCATCGGGTGCTTGACCEST: gi|211449237|gb|FL468489.1|FL468489
genomic: AGAAAGGGCAGTATTTCCCAGTGACAGCAGTCCAACGCTTCGATGCTGCGgtgagctgag ... ttatccgcagGGCAAACGCATCGAGAATGGCATATATTTGGGCCCCATCGGGTGCTTGACC
EST: GAAAGGGCAGTATTTCCCAGTGACAGCAGTCCAACGCTTTCGATGCTGCG GGGAAACGCATCGAGAATGGCATATATTTGGGCCCCATCGGGTGCTTGACC
genomic: GAAAGGGCAGTATTTCCCAGTGACAGCAGTCCAACGC-TTCGATGCTGCGgtgagctgag ... ttatccgcagGGCAAACGCATCGAGAATGGCATATATTTGGGCCCCATCGGGTGCTTGACC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTCGGCTGGAGAAAGGGCAGTATTTCCCAGTGACAGCAGTCCAACGCTTCGATGCTGCGgtgagctgagcttatcatggcaacccctctatgaatatatgatatgcttgttctgatcagtggtacctgaacaatctagtacttgagtttctatgcatgc
- - - - - - - - - - - - - - - - - - - - - - - - - - ATGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - TGCTGC