Skip to another splice site:
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 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TGCCAGGTGAACTTCAAGCGGCTCTCACTTACTGACATCAAGATTGACATCAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctagagcttatgttgtggacctctttagcaccgccacactttattcaacttctatattctagatgattgcccataagagaatggtgacacttatttgatctcttgctattcttttttcag

Basic information

species Zea mays
transcript GRMZM2G140116_T01
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G140116_T01 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os02g40880.1 (Oryza sativa), 5'ss of exon 3
TGCCAGGTGAACTTCAAGCGGCTCTCACTTACTGACATCAAGATTGACATCAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctagagcttatgttgtggacctctttagcaccgccacactttattcaacttctatattctagatgattgcccataagagaatggtgacacttatttgatctcttgctattcttttttcag
|||||| | ||||||||| |||| || || |||||||||||||||||||||||||||||||| ||||||||| |  |||| ||||| |||||||| |||||| | | |  |  || || |    | |   | ||||       | ||   || |  ||||   |||   || | |    |      | |                                     
TGCCAGATCAACTTCAAGAGGCTTTCCCTGACTGACATCAAGATTGACATCAAACGTGTCCCGAAGAAGACAACTTTGATTAAGGCTATGGAGGAGGCTGgttagtatgaatgttgtgctaccaatcctatcagcagttatttatttctgtccatgtctaa--tctgagtggtggttattctatttaag-------------------------------------

upper sequence: GRMZM2G140116_T01 (Zea mays), 5'ss of exon 3
lower sequence: GLYMA02G00680.1 (Glycine max), 5'ss of exon 3
TGCCAGGTGAACTTCAAGCGGCTCTCACTTACTGACATCAAGATTGACATCAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctagagcttatgttgtggacctctt-tagcaccgccacactttattcaacttctatattctagatgattgcccataagagaatggtgacacttatttgatctcttgctattcttttttcag
| ||| |||||||||||| |||| ||||| |||||||||||||| || || ||  |  ||||||||||||  |  || ||  | || |||||||  ||||||   |  | || ||     | | |  | || |   |  |  |   ||| ||    |||   | |     || || | |||   | |                                        
TCCCAAGTGAACTTCAAGAGGCTATCACTCACTGACATCAAGATCGATATTAAGAGGATCCCCAAGAAGAAGGATCTCATTCAAGCCATGGAGGCTGCTGgttggtaca-agttttcacggagaaattgttattttattggaagcatttctttttgttcatcagtt----tgttttctcattgaacag---------------------------------------

upper sequence: GRMZM2G140116_T01 (Zea mays), 5'ss of exon 3
lower sequence: GLYMA10G00680.1 (Glycine max), 5'ss of exon 3
TGCCAGGTGAACTTCAAGCGGCTCTCACTTACTGACATCAAGATTGACATCAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctagagcttatgttgtggacctctt-tagcaccgccacactttattcaacttctatattctagatgattgcccataagagaatggtgacacttatttgatctcttgctattcttttttcag
| ||| |||||||||||| ||||||| || ||||||||||||||||| || ||  |  | ||||||||||  |  || ||  | || |||||||  ||||||   |  |  | ||   |   | |  | || |   |  |  |   ||| ||    |||   | | |   |  |||   |  ||                                           
TCCCAAGTGAACTTCAAGAGGCTCTCGCTCACTGACATCAAGATTGATATTAAGAGGATTCCCAAGAAGAAGGATCTCATTCAAGCCATGGAGGCTGCTGgttggtacac-gttttcatgaagaaattgttattttattggaagcatttctttttgttcatcagtttgttttcttgttgaacag-------------------------------------------

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32911809|gb|CF016621.1|CF016621
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211533761|gb|FL303615.1|FL303615
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211530756|gb|FL303602.1|FL303602
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|15079886|gb|BI388867.1|BI388867
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211536770|gb|FL303629.1|FL303629
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211143363|gb|FL303692.1|FL303692
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211261808|gb|FL064149.1|FL064149
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211527752|gb|FL303583.1|FL303583
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211146222|gb|FL303713.1|FL303713
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211539771|gb|FL303636.1|FL303636
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGASG-AGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|213170681|gb|FM184208.1|FM184208
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|40336326|gb|CK370396.1|CK370396
EST:     CAAGCGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|31664510|gb|CD573443.1|CD573443
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211372372|gb|FL088523.1|FL088523
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|67022364|gb|CO451113.1|CO451113
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211542796|gb|FL303661.1|FL303661
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGGTC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTG-TC
EST: gi|211536765|gb|FL303624.1|FL303624
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|32910529|gb|CF015341.1|CF015341
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|113702161|gb|EE679665.1|EE679665
EST:     CAAGCGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|15313541|gb|BI478750.1|BI478750
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211143352|gb|FL303681.1|FL303681
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211261811|gb|FL064152.1|FL064152
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211536771|gb|FL303630.1|FL303630
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211527753|gb|FL303584.1|FL303584
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTKGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|148986741|gb|EE030533.2|EE030533
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211539782|gb|FL303647.1|FL303647
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|71306187|gb|DR789244.1|DR789244
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211530749|gb|FL303595.1|FL303595
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|4646709|gb|AI491572.2|AI491572
EST:     CAAACGTGTCCCCAAGAAGCCAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211524749|gb|FL303573.1|FL303573
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|50332509|gb|CO527635.1|CO527635
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211144789|gb|FL303700.1|FL303700
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211536769|gb|FL303628.1|FL303628
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|33942215|gb|CF348815.1|CF348815
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|87155926|gb|DY400715.1|DY400715
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211533760|gb|FL303614.1|FL303614
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAACCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|22545563|gb|BU097922.1|BU097922
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211533755|gb|FL303609.1|FL303609
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211530750|gb|FL303596.1|FL303596
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211143351|gb|FL303680.1|FL303680
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|16919951|gb|BM074436.1|BM074436
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211146218|gb|FL303709.1|FL303709
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211542785|gb|FL303650.1|FL303650
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211533763|gb|FL303617.1|FL303617
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211146220|gb|FL303711.1|FL303711
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|15313539|gb|BI478749.1|BI478749
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|37386208|gb|CF630286.1|CF630286
EST:     CAAGCGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211542797|gb|FL303662.1|FL303662
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211533751|gb|FL303605.1|FL303605
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60349639|gb|DN216612.1|DN216612
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|31664511|gb|CD573444.1|CD573444
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211144787|gb|FL303698.1|FL303698
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211141913|gb|FL303665.1|FL303665
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|29130154|gb|CB380858.1|CB380858
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211530745|gb|FL303591.1|FL303591
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60343863|gb|DN210836.1|DN210836
EST:     CAAGCGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211261814|gb|FL064155.1|FL064155
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|37393120|gb|CF633817.1|CF633817
EST:     CAAGCGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211143361|gb|FL303690.1|FL303690
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211527756|gb|FL303587.1|FL303587
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|32851326|gb|CD991007.1|CD991007
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211143357|gb|FL303686.1|FL303686
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211536774|gb|FL303633.1|FL303633
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60341459|gb|DN208432.1|DN208432
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60354734|gb|DN221707.1|DN221707
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|32912862|gb|CF017674.1|CF017674
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCGAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|71417121|gb|DR803927.1|DR803927
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211542787|gb|FL303652.1|FL303652
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211539777|gb|FL303642.1|FL303642
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|5069721|gb|AI737686.1|AI737686
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|61119757|gb|DN560718.1|DN560718
EST:     CAAGCGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211527749|gb|FL303580.1|FL303580
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211144785|gb|FL303696.1|FL303696
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211527751|gb|FL303582.1|FL303582
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|32908584|gb|CF013397.1|CF013397
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211533764|gb|FL303618.1|FL303618
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|32933013|gb|CF037825.1|CF037825
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAACTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211542788|gb|FL303653.1|FL303653
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|71427650|gb|DR808700.1|DR808700
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211533752|gb|FL303606.1|FL303606
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211533754|gb|FL303608.1|FL303608
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|15100497|gb|BI396288.1|BI396288
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211144784|gb|FL303695.1|FL303695
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|26557228|gb|CA829463.1|CA829463
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211530748|gb|FL303594.1|FL303594
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211143355|gb|FL303684.1|FL303684
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAARACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60348097|gb|DN215070.1|DN215070
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211141917|gb|FL303669.1|FL303669
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|32912436|gb|CF017248.1|CF017248
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211524745|gb|FL303569.1|FL303569
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211524742|gb|FL303566.1|FL303566
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAARYGGGAGAACAGCTCATGGGGCAAGARGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60357236|gb|DN224209.1|DN224209
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211144790|gb|FL303701.1|FL303701
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211542784|gb|FL303649.1|FL303649
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211146223|gb|FL303714.1|FL303714
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211261810|gb|FL064151.1|FL064151
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|60399266|gb|DN232080.1|DN232080
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211536768|gb|FL303627.1|FL303627
EST:     CAAACGTGTCCC-AAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAG
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAG
EST: gi|211542786|gb|FL303651.1|FL303651
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|71306186|gb|DR789243.1|DR789243
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|32911128|gb|CF015940.1|CF015940
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211141915|gb|FL303667.1|FL303667
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211141916|gb|FL303668.1|FL303668
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|5860470|gb|AW011692.1|AW011692
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGT
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGT
EST: gi|32908470|gb|CF013283.1|CF013283
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211536764|gb|FL303623.1|FL303623
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211533750|gb|FL303604.1|FL303604
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAWGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211144794|gb|FL303705.1|FL303705
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211539783|gb|FL303648.1|FL303648
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211141925|gb|FL303677.1|FL303677
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211141919|gb|FL303671.1|FL303671
EST:     CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
EST: gi|211536763|gb|FL303622.1|FL303622
EST:     CAAACGTGTCCCCAAGAAGACAACCCTGATCAAGGCGATGGAGGAAGCTG                         ATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC
genomic: CAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1061

TGCCAGGTGAACTTCAAGCGGCTCTCACTTACTGACATCAAGATTGACATCAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCCAGAAGAGGAGAGCATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1214

TGCCAGGTGAACTTCAAGCGGCTCTCACTTACTGACATCAAGATTGACATCAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCCAGAAGAGGAGAGCATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 1071

TGCCAGGTGAACTTCAAGCGGCTCTCACTTACTGACATCAAGATTGACATCAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCCAGAAGAGGAGAGCATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 602

TGCCAGGTGAACTTCAAGCGGCTCTCACTTACTGACATCAAGATTGACATCAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctag ... cttttttcagATGTGAAGACCAAGTGGGAGAACAGCTCATGGGGCAAGAAGCTGATTGTCCAGAAGAGGAGAGCATCGCTCAATGACTTTGATAGGTTCAAAGTCATGCT


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TGCCAGGTGAACTTCAAGCGGCTCTCACTTACTGACATCAAGATTGACATCAAACGTGTCCCCAAGAAGACAGCCCTGATCAAGGCGATGGAGGAAGCTGgtaactctagagcttatgttgtggacctctttagcaccgccacactttattcaacttctatattctagatgattgcccataagagaatggtgacacttatttgatctcttgctattcttttttcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GGAGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG