1 5' 3' | 2 5' 3' | 3 5' 3' |
GGGAAGGAACTCCAACTCTATGCGTGAGTTTCTGGAGAAGAACTACAAGGAGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAGgtatatcataaataaattcagttttaaatttcctgcaatttaagcaacaggctataaacataatgaaggttttgccgatgttttggttcgcttcaaatgt...
species | Zea mays |
transcript | GRMZM2G138128_T03 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGACCTCCGGCAAGGAGGCCATCAAGCTTGCTATTCGTGCACTTCTAGAG GTTGTTGAAAGTGGTGGGAAGAACATCGAGGTTGCAGTGATGACAAAGAAGEST: gi|149051858|gb|EE155986.2|EE155986
genomic: AGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAGgtatatcata ... ttactgatagGTTGTTGAAAGTGGTGGGAAGAACATCGAGGTTGCAGTGATGACAAAGAAG
EST: AGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAG GTTGTTGGAAAGTGGTGGGAAGAACATCGAGGGTGCAGTGATGACAAAGAAEST: gi|211304635|gb|FL018755.1|FL018755
genomic: AGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAGgtatatcata ... ttactgatagGTTGTTG-AAAGTGGTGGGAAGAACATCGAGGTTGCAGTGATGACAAAGAA
EST: AGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAG GTTGTTGAAAGTGGTGGGAAGA-CATCGAGGTTGCAGTGEST: gi|148952506|gb|EC898333.2|EC898333
genomic: AGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAGgtatatcata ... ttactgatagGTTGTTGAAAGTGGTGGGAAGAACATCGAGGTTGCAGTG
EST: AGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAG GTTGTTGAAAGTGGTGGGAAGAACATCGAGGTTGCAGTGATGACAAAGAAGEST: gi|67039736|gb|CO465991.1|CO465991
genomic: AGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAGgtatatcata ... ttactgatagGTTGTTGAAAGTGGTGGGAAGAACATCGAGGTTGCAGTGATGACAAAGAAG
EST: AGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAG GTTGTTGAAAGTGGTGGGAAGAACATCGAGGTTGCAGTGATGACAAAGAAGEST: gi|91873762|gb|EB403719.1|EB403719
genomic: AGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAGgtatatcata ... ttactgatagGTTGTTGAAAGTGGTGGGAAGAACATCGAGGTTGCAGTGATGACAAAGAAG
EST: AGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAG GTTGTTGAAAGTGGTGGGAAGAACATCGAGGTTGCAGTGATGACAAAGAAG
genomic: AGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAGgtatatcata ... ttactgatagGTTGTTGAAAGTGGTGGGAAGAACATCGAGGTTGCAGTGATGACAAAGAAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGGAAGGAACTCCAACTCTATGCGTGAGTTTCTGGAGAAGAACTACAAGGAGACCTCCGGCAAGGAGACCATCAAGCTTGCTATTCGTGCACTTCTAGAGgtatatcataaataaattcagttttaaatttcctgcaatttaagcaacaggctataaacataatgaaggttttgccgatgttttggttcgcttcaaatgt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT