1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
CCAACCTCCTCAGCGGAGGTGACCTGCAATGTTTGTTATGATGATGTGCCACCCTCGTGTGCCTTGGAGATGGACTGCGGCCACAGCTACTGCAGTGATTgtgagtaatatccaattaggttggctcagatgattccgcattttcatctttcatgttctagtttatagattctggtagagaaatggtgtgtaatgcatta...
species | Zea mays |
transcript | GRMZM2G136293_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACCCTCGTGTGCCTTGGAGATGGACTGCGGCCACAGCTACTGCAGTGATT GTTGGACTGAATATTTCCATTGTGAAAATTAATGAGGGTCAGAGCCGGGGTEST: gi|71437550|gb|DR818600.1|DR818600
genomic: ACCCTCGTGTGCCTTGGAGATGGACTGCGGCCACAGCTACTGCAGTGATTgtgagtaata ... cctcacctagGTTGGACTGAATATTTC-ATTGTGAAAATTAATGAGGGTCAGAGCCGGCGT
EST: ACCCTCGTGTGCCTTGGAGATGGACTGCGGCCACAGCTACTGCAGTGATT GTTGGACTGAATATTTCATTGTGAAAATTAATGAGGGTCAGAGCCGGCGTG
genomic: ACCCTCGTGTGCCTTGGAGATGGACTGCGGCCACAGCTACTGCAGTGATTgtgagtaata ... cctcacctagGTTGGACTGAATATTTCATTGTGAAAATTAATGAGGGTCAGAGCCGGCGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCAACCTCCTCAGCGGAGGTGACCTGCAATGTTTGTTATGATGATGTGCCACCCTCGTGTGCCTTGGAGATGGACTGCGGCCACAGCTACTGCAGTGATTgtgagtaatatccaattaggttggctcagatgattccgcattttcatctttcatgttctagtttatagattctggtagagaaatggtgtgtaatgcatta
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGGAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGAT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CTGCAG