1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' |
TCAGCAGCTAGTATTCTCTGCTTCCGAGCTAAGAAAATGGGAACCGTAAGGCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTGgtatggctttttcctatctatgtatataccatataggtggtactgttccagttttacatcacagtgttttttgaggaatctagagggcccagggccctac...
species | Zea mays |
transcript | GRMZM2G135359_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTG GTGTACCTTCGCTGAAACGATCAGAGCTGGAAACGGCATGCGAGGATTTCAEST: gi|211161240|gb|FL160681.1|FL160681
genomic: GCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTGgtatggcttt ... atatttctagGTGTACCTTCGCTGAAACGATCAGAGCTGGAAACGGCATGCGAGGATTTCA
EST: GCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTG GTGTACCTTCGCTGEST: gi|211161241|gb|FL160682.1|FL160682
genomic: GCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTGgtatggcttt ... atatttctagGTGTACCTTCGCTG
EST: GCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTG GTGTACCTTCGCTGAAACGATCAGAGCTGGAAACGGCATGCGAGGATEST: gi|211161242|gb|FL160683.1|FL160683
genomic: GCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTGgtatggcttt ... atatttctagGTGTACCTTCGCTGAAACGATCAGAGCTGGAAACGGCATGCGAGGAT
EST: GCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTG GTGTACCTTCGCTGAAACGATCAGAGCTGEST: gi|76012816|gb|DT939986.1|DT939986
genomic: GCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTGgtatggcttt ... atatttctagGTGTACCTTCGCTGAAACGATCAGAGCTG
EST: GCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTG GTGTACCTTCGCTGAAACGATCAGAGCTGGAAACGGCATGCGAGGATTTCAEST: gi|149070912|gb|EE159319.2|EE159319
genomic: GCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTGgtatggcttt ... atatttctagGTGTACCTTCGCTGAAACGATCAGAGCTGGAAACGGCATGCGAGGATTTCA
EST: GCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTG GTGTACCTTCGCTGAAACGATCAGAGCTGGAAACGGCATGCGAGGATTTCA
genomic: GCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTGgtatggcttt ... atatttctagGTGTACCTTCGCTGAAACGATCAGAGCTGGAAACGGCATGCGAGGATTTCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TCAGCAGCTAGTATTCTCTGCTTCCGAGCTAAGAAAATGGGAACCGTAAGGCCATGGGCGACAGGTCTAAGTGGACAATTGCAGAAAGCTTTTGTAACTGgtatggctttttcctatctatgtatataccatataggtggtactgttccagttttacatcacagtgttttttgaggaatctagagggcccagggccctac
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