1 5' 3' | 2 5' 3' | 3 5' 3' |
AAAGGAGGCAAGCTGAGGCTAACCGCATCAGGGAGAAATACCCTGACAGAATCCCTgtaagccttaattaatttttacccatgtcctctgattatttccatgatagcttttgtgttcattcaaacctgctttcttgtaatatag
species | Zea mays |
transcript | GRMZM2G134613_T04 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GGCAAGCTGAGGCTAACCGCATCAGGGAGAAATACCCTGACAGAATCCCT GTCATTGTTGAGAAGGCCGAGAGGAGTGACATCCCAGACATTGACAAGAAAEST: gi|91874951|gb|EB404908.1|EB404908
genomic: GGCAAGCTGAGGCTAACCGCATCAGGGAGAAATACCCTGACAGAATCCCTgtaagcctta ... tgtaatatagGTCATTGTTGAGAAGGCCGAGAGGAGTGACATCCCAGACATTGACAAGAAA
EST: GGCAAGCTGAGGCTAACCGCATCAGGGAGAAATACCCTGACAGAATCCCT GTCATTGTTGAGAAGGCCGAGAGGAGTGACATCCCAGACATTGACAAGAAA
genomic: GGCAAGCTGAGGCTAACCGCATCAGGGAGAAATACCCTGACAGAATCCCTgtaagcctta ... tgtaatatagGTCATTGTTGAGAAGGCCGAGAGGAGTGACATCCCAGACATTGACAAGAAA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAAGGAGGCAAGCTGAGGCTAACCGCATCAGGGAGAAATACCCTGACAGAATCCCTgtaagccttaattaatttttacccatgtcctctgattatttccatgatagcttttgtgttcattcaaacctgctttcttgtaatatag
- - - - CAAGCT
- - - - AAGCTG
- - - - - AGCTGA
- - - - - - - - - - - - - - - GGAGAA