1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GAACCATTTGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAGgtactgcacctttctaagtttttttatatgaagaatgtatagcttttcgctttctacaaatagggatgcaaacagccaactccctctgttgcaataagca...
species | Zea mays |
transcript | GRMZM2G134389_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAG ACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAGEST: gi|5555286|gb|AI881237.1|AI881237
genomic: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAGgtactgcacc ... tcctttgcagACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAG
EST: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGCCTTAG ACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAGEST: gi|5555280|gb|AI881231.1|AI881231
genomic: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAGgtactgcacc ... tcctttgcagACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAG
EST: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAG ACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAGEST: gi|5555378|gb|AI881329.1|AI881329
genomic: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAGgtactgcacc ... tcctttgcagACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAG
EST: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAG ACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAGEST: gi|93281321|gb|EB673585.1|EB673585
genomic: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAGgtactgcacc ... tcctttgcagACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAG
EST: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAG ACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAGEST: gi|50339825|gb|CO534951.1|CO534951
genomic: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAGgtactgcacc ... tcctttgcagACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAG
EST: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAG ACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAGEST: gi|32845463|gb|CD985144.1|CD985144
genomic: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAGgtactgcacc ... tcctttgcagACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAG
EST: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAG ACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAGEST: gi|78087468|gb|DV515861.1|DV515861
genomic: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAGgtactgcacc ... tcctttgcagACCCAAGAAACCAACCTCTGCTTATTCATTGTAAGAGAGGCAAG
EST: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAG ACCCAAGAAACCAACCTCTGCTTAEST: gi|76294316|gb|DV033884.1|DV033884
genomic: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAGgtactgcacc ... tcctttgcagACCCAAGAAACCAACCTCTGCTTA
EST: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAG ACCCCAGAAACCAACCTCTGCTTA
genomic: TGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAGgtactgcacc ... tcctttgcagACCCAAGAAACCAACCTCTGCTTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACCATTTGTCAATATACCCGATGACAAAATAAGGGAGGCGCTCAAAGTTGTCTTAGgtactgcacctttctaagtttttttatatgaagaatgtatagcttttcgctttctacaaatagggatgcaaacagccaactccctctgttgcaataagca
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