1 5' 3' | 2 5' 3' | 3 5' 3' |
CAGCTAAAAGGAGCCGCAGAACAACCTGCACGCAGTATATCATCTCGATGGACGCCGACAACATATCGAGATCTAGCAGCACGTACATCGGAAAGCTGAGgtaacagaatcgaaacgcaatgcaacaagcgatcgggttcatttgactacgtacgtacgtcggctattaattgagacgattccggccactcccag
species | Zea mays |
transcript | GRMZM2G129288_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GACGCCGACAACATATCGAGATCTAGCAGCACGTACATCGGAAAGCTGAG GTCAAACTTCCTGGGCACGAAGTTCGTGGTCTCAGAAACGCAGCCGCCEST: gi|149111284|gb|EE294782.2|EE294782
genomic: GACGCCGACAACATATCGAGATCTAGCAGCACGTACATCGGAAAGCTGAGgtaacagaat ... ccactcccagGTCAAACTTCCTGGGCACGAAGTTCGTGGTCTCAGACACGCAGCCGCC
EST: GACGCCGACAACATATCGAGATCTAGCAGCACGTACATCGGAAAGCTGAG GTCAAACTTCCTGGGCACGAAGTTCGTGGTCTCAGACACGCAGCCGCCCCC
genomic: GACGCCGACAACATATCGAGATCTAGCAGCACGTACATCGGAAAGCTGAGgtaacagaat ... ccactcccagGTCAAACTTCCTGGGCACGAAGTTCGTGGTCTCAGACACGCAGCCGCCCCC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CAGCTAAAAGGAGCCGCAGAACAACCTGCACGCAGTATATCATCTCGATGGACGCCGACAACATATCGAGATCTAGCAGCACGTACATCGGAAAGCTGAGgtaacagaatcgaaacgcaatgcaacaagcgatcgggttcatttgactacgtacgtacgtcggctattaattgagacgattccggccactcccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGATC
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA