1 5' 3' | 2 5' 3' | 3 5' 3' |
ATCGGCGAACTCGCCGGCCTCGCCGTTGGAGCCACCGTCCTGCTAAACGTGCTCTTTGCCGGgtgggtataaatacgtacagttcatataccttgtaaaaactaatactaattcagtgcactagctagttaaaaaaacgcagctcatgtgatgggatgctgatgcgatgcgctgcgcag
species | Zea mays |
transcript | GRMZM2G126582_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GCCGGCCTCGCCGTTGGAGCCACCGTCCTGCTAAACGTGCTCTTTGCCGG GCCTATATCCGGAGCGTCCATGAACCCGGCGAGGACCCTGGGCCCGGCGCTEST: gi|67016011|gb|CO444760.1|CO444760
genomic: GCCGGCCTCGCCGTTGGAGCCACCGTCCTGCTAAACGTGCTCTTTGCCGGgtgggtataa ... cgctgcgcagGCCTATATCAGGAGCGTCCATGAACCCGGCGAGGACCCTGGGCCCGGCGCT
EST: GCTGGCCTCGCCGTTGGAGCCACCGTACTGCTTAACGTGCTCTTTGCCGG GCCTATATCANGAGCGTNCATGAACCCCGCGAGGACCCTGGGCCCNGCGCTEST: gi|78026055|gb|DV494442.1|DV494442
genomic: GCCGGCCTCGCCGTTGGAGCCACCGTCCTGCTAAACGTGCTCTTTGCCGGgtgggtataa ... cgctgcgcagGCCTATATCAGGAGCGTCCATGAACCCGGCGAGGACCCTGGGCCCGGCGCT
EST: GCCGGCCTCGCCGTTGGAGCCACCGTCCTGCTAAACGTGCTCTTTGCCGG GCCTATATCCGGAGCGTCCATGAACCCGGCGAGGACCCTGGGCCCGGCGCT
genomic: GCCGGCCTCGCCGTTGGAGCCACCGTCCTGCTAAACGTGCTCTTTGCCGGgtgggtataa ... cgctgcgcagGCCTATATCAGGAGCGTCCATGAACCCGGCGAGGACCCTGGGCCCGGCGCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| ATCGGCGAACTCGCCGGCCTCGCCGTTGGAGCCACCGTCCTGCTAAACGTGCTCTTTGCCGGgtgggtataaatacgtacagttcatataccttgtaaaaactaatactaattcagtgcactagctagttaaaaaaacgcagctcatgtgatgggatgctgatgcgatgcgctgcgcag
- - - - - - - - - - - - TTGGAG