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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAAGTCAGCAAGGCTTAGGCAAGCGAAAGAGGAGGCAGAGAGGGAAATAGCCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacacttgcacaatcctattcctaattccccgtgtgccagcggaaattatatccatcccttttgtgccactggctccccatgtcacacgcacaaa...

Basic information

species Zea mays
transcript GRMZM2G124103_T02
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G124103_T02 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os04g51270.1 (Oryza sativa), 5'ss of exon 3
TAAGTCAGCAAGGCTTAGGCAAGCGAAAGAGGAGGCAGAGAGGGAAATAGCCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacacttgcacaatcctattcctaattccccgtgtgc-cagcggaaattatatccatcccttttgtgccactggctccccatgtcacacgcacaaa
 || || ||||||||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| || ||||||||||| |||||||||||  ||   | |  ||  |  |    |   |  |||||   ||   | |||        || | ||   | | |||  |    ||| |    ||    
AAAATCGGCAAGGCTTAGGCAAGCAAAAGAGGAGGCTGAGAGGGAAATAGCTGAATACCGTGCCCAGATGGAGGCTGAATTTCAGAGGAAGGTTGCAGAGgtatgttcatcgggaacatatttgtgtagaaggcttgtgtgtataggatacattcccaattcccatattcatctaatggtcctatttgttatttccag---
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211422294|gb|FK993270.1|FK993270
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|37399788|gb|CF637230.1|CF637230
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|18164474|gb|BM334313.1|BM334313
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|37378974|gb|CF626211.1|CF626211
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211419701|gb|FK993263.1|FK993263
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211302013|gb|FK993252.1|FK993252
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211422303|gb|FK993279.1|FK993279
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|71770360|gb|DR968297.1|DR968297
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGGCGCAGAA                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAAACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211512286|gb|FL437429.1|FL437429
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211422300|gb|FK993276.1|FK993276
EST:     CCGAATACCGTGCCCAGATGGAGACTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|4572810|gb|AI586459.1|AI586459
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211419698|gb|FK993260.1|FK993260
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|45567279|gb|CK985493.1|CK985493
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211302012|gb|FK993251.1|FK993251
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|78121730|gb|DV540114.1|DV540114
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|113702958|gb|EE680462.1|EE680462
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211422299|gb|FK993275.1|FK993275
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211419692|gb|FK993254.1|FK993254
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211419702|gb|FK993264.1|FK993264
EST:     CGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTC
genomic: CGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGG-AAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTC
EST: gi|211422292|gb|FK993268.1|FK993268
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|32863979|gb|CF003661.1|CF003661
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|37398144|gb|CF636381.1|CF636381
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|116816205|gb|EC858924.1|EC858924
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCT
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCT
EST: gi|211419703|gb|FK993265.1|FK993265
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|60347630|gb|DN214603.1|DN214603
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211419693|gb|FK993255.1|FK993255
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211422298|gb|FK993274.1|FK993274
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|32863459|gb|CF003141.1|CF003141
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|32937380|gb|CF042199.1|CF042199
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|44900255|gb|CK826800.1|CK826800
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|32863978|gb|CF003660.1|CF003660
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|16920247|gb|BM074571.1|BM074571
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211422301|gb|FK993277.1|FK993277
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTC-CAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211419695|gb|FK993257.1|FK993257
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTC-CAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|37400054|gb|CF637372.1|CF637372
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|9732724|gb|BE511476.1|BE511476
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|37378850|gb|CF626141.1|CF626141
EST:     CCGAATCCCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|78121729|gb|DV540113.1|DV540113
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|37378689|gb|CF626050.1|CF626050
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211419696|gb|FK993258.1|FK993258
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211419691|gb|FK993253.1|FK993253
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
EST: gi|211422296|gb|FK993272.1|FK993272
EST:     CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAG                         AGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG
genomic: CCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacac ... gtgactacagAGCAGTGGTGACTCTGGTGCGAACGTCAAGCGTCTCGAGGAAGAGACAACG

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TAAGTCAGCAAGGCTTAGGCAAGCGAAAGAGGAGGCAGAGAGGGAAATAGCCGAATACCGTGCCCAGATGGAGGCTGAGTTCCAGAGGAAGGTCGCAGAGgtatgcacacttgcacaatcctattcctaattccccgtgtgccagcggaaattatatccatcccttttgtgccactggctccccatgtcacacgcacaaa

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GATGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAGG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGGA