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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaattctgtaaattctgtttacatattataaataattgtcagattgtcacatcttagcagctaaaagtggatttgaatttgatactagttttg...

Basic information

species Zea mays
transcript GRMZM2G121820_T01
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G121820_T01 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os01g59440.2 (Oryza sativa), 5'ss of exon 3
TTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaattctgtaaattctgtttacatattataaataattgtcagattgtcacatcttagcagctaaa-----agtggatttgaatttgatactagttttg
|||| |||||||||||||| |||||||| ||| ||||||||||||||||||| ||||| ||||||||  | ||||| || || | |||||||||||||||||||||||     ||| | |    |   |  ||| ||||  | |   |  || |||||| |||||  || |         | || || |  |  | |    ||  
TTGGTAATTTGAAGAATCTTATAAGCTTGGACCTGTACAAGAACAACATTTCTGGGACTATACCTCCAACACTTGGGAAATTAACGTCCCTTGTATTCTTgtaagtttg----tgttattcaaatgatctcattgtaaaatagttctaagttctcacatgttagctactgatttcatgccgtatatgcacattctgcatacttc-

upper sequence: GRMZM2G121820_T01 (Zea mays), 5'ss of exon 3
lower sequence: Vv08s0040g00520.t01 (Vitis vinifera), 5'ss of exon 3
TTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaattctgt---aaattctgtttacatattataaataattgtcagattgt-cacatcttagcagctaaaagtggatttgaatttgatactagttttg
|||| || || ||||| ||||| ||||| || |||||||| |||||||| ||||||   || ||||| ||  | |||||||||||||| || || ||||||| ||||| |     |   ||| | |  |   |  |||| | |    | ||||   |    |  ||||    |     |||||  |  ||| ||  |  |    
TTGGAAACTTAAAGAACCTAATCAGCTTGGATTTGTACAACAACAACATCTCGGGGGTTATTCCTCCGGCATTGGGAAAGTTGAAGTCTCTGGTGTTCTTgtgagtttcacatcatcagaaaatgttctcttactttattagtttgagccagacaatgtgaactttaggccttcttcttggatcagttttttatcttcat----
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|9733713|gb|BE512465.1|BE512465
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|17929723|gb|BM266689.1|BM266689
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|71763196|gb|DR961133.1|DR961133
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|91874179|gb|EB404136.1|EB404136
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|26557278|gb|CA829513.1|CA829513
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|71766703|gb|DR964640.1|DR964640
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|60358579|gb|DN225552.1|DN225552
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|15188221|gb|BI417198.1|BI417198
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|30087058|gb|CB885266.1|CB885266
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|21809925|gb|BQ668243.1|BQ668243
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCC
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCC
EST: gi|22819416|gb|BU499506.1|BU499506
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGC
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGC
EST: gi|30032043|gb|CB833894.1|CB833894
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|149095176|gb|EE180793.2|EE180793
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTGGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|5895619|gb|AW036865.1|AW036865
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|60394754|gb|DN227624.1|DN227624
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|148972291|gb|EE023193.2|EE023193
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|31612157|gb|CD568779.1|CD568779
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|211244696|gb|FL479034.1|FL479034
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|76014413|gb|DT941583.1|DT941583
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCCCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|16137383|gb|BI894248.1|BI894248
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|4966551|gb|AI691407.1|AI691407
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|30086962|gb|CB885170.1|CB885170
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|22545940|gb|BU098299.1|BU098299
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|91873861|gb|EB403818.1|EB403818
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|22819407|gb|BU499497.1|BU499497
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTG
EST: gi|30306876|gb|CD001549.1|CD001549
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|18170321|gb|BM340161.1|BM340161
EST:     GTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: GTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|60338279|gb|DN205252.1|DN205252
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|109637591|gb|EC591136.1|EC591136
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|15177611|gb|BI398550.1|BI398550
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|71436702|gb|DR817752.1|DR817752
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|78089347|gb|DV517721.1|DV517721
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|211233135|gb|FL455795.1|FL455795
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|21809924|gb|BQ668242.1|BQ668242
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|211082646|gb|FL412210.1|FL412210
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|148941830|gb|EC886803.2|EC886803
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|76012011|gb|DT939181.1|DT939181
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|4885819|gb|AI676939.1|AI676939
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|26559721|gb|CA831956.1|CA831956
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCC
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCC
EST: gi|9733712|gb|BE512464.1|BE512464
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|32940802|gb|CF045621.1|CF045621
EST:     TCGGGGACAATACCTCCCGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACCTCGCTG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAAC-TCGCTG
EST: gi|22545450|gb|BU097809.1|BU097809
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|60349397|gb|DN216370.1|DN216370
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|148933347|gb|EC877009.2|EC877009
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|15177610|gb|BI398549.1|BI398549
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|211478992|gb|FL272010.1|FL272010
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|28909789|gb|CB331101.1|CB331101
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|89131927|gb|DY577100.1|DY577100
EST:     AGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: AGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|148933348|gb|EC877010.2|EC877010
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|149000066|gb|EE037172.2|EE037172
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|60396509|gb|DN229378.1|DN229378
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|149095177|gb|EE180794.2|EE180794
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|101383854|gb|EB813982.1|EB813982
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAGGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|15323606|gb|BI478890.1|BI478890
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|30306664|gb|CD001337.1|CD001337
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|22549219|gb|BU101420.1|BU101420
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|15323607|gb|BI478891.1|BI478891
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|30088202|gb|CB886407.1|CB886407
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|78027497|gb|DV495884.1|DV495884
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|149000067|gb|EE037173.2|EE037173
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|211152911|gb|FL469818.1|FL469818
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|37373616|gb|CF623115.1|CF623115
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|18659525|gb|BM500384.1|BM500384
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|149000533|gb|EE037716.2|EE037716
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|78077979|gb|DV506396.1|DV506396
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|211392189|gb|FL369325.1|FL369325
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|37396731|gb|CF635659.1|CF635659
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|71766702|gb|DR964639.1|DR964639
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|78077978|gb|DV506395.1|DV506395
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|22521623|gb|BU080434.1|BU080434
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|60348625|gb|DN215598.1|DN215598
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|22546266|gb|BU098577.1|BU098577
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|78089348|gb|DV517722.1|DV517722
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|31997810|gb|CD661783.1|CD661783
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|31997809|gb|CD661782.1|CD661782
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|71448904|gb|DR829954.1|DR829954
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|30031710|gb|CB833561.1|CB833561
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|71319607|gb|DR796562.1|DR796562
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|110202223|gb|EC884120.1|EC884120
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|71758054|gb|DR955991.1|DR955991
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|60398400|gb|DN231216.1|DN231216
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|14243408|gb|BG841108.2|BG841108
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|29576741|gb|CB616853.1|CB616853
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|148994954|gb|EE034307.2|EE034307
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|40334004|gb|CK368074.1|CK368074
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|37388668|gb|CF631545.1|CF631545
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|91874178|gb|EB404135.1|EB404135
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
EST: gi|37381290|gb|CF627520.1|CF627520
EST:     TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTT                         GCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG
genomic: TCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGG

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 7 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 494

TTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGGAATATCTAGTCTCAAAGTTGT


Block sizes: 49 (upstream exon), 47 (downstream exon)
Score: 12

TTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGGAATATCTAGTCTCAAAGTTGT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 529

TTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGGAATATCTAGTCTCAAAGTTGT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 678

TTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGGAATATCTAGTCTCAAAGTTGT


Block sizes: 49 (upstream exon), 37 (downstream exon)
Score: 28

TTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGGAATATCTAGTCTCAAAGTTGT


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 750

TTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGGAATATCTAGTCTCAAAGTTGT


Block sizes: 49 (upstream exon), 47 (downstream exon)
Score: 32

TTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaa ... cactttgtagGCGTCTCAATGGCAATCATTTGACTGGGCCCATCCCAAGGGAACTCGCTGGAATATCTAGTCTCAAAGTTGT


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TTGGCAATTTGAAGAATCTAATAAGCTTCGACTTGTACAAGAACAACATTTCGGGGACAATACCTCCTGCCCTTGGAAAGTTGAAGTCCCTTGTATTCTTgtaagtttaattctgtaaattctgtttacatattataaataattgtcagattgtcacatcttagcagctaaaagtggatttgaatttgatactagttttg

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG