1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
TGGTGATTTTCGTCTAAAGTGGGATCCCATGCTTGCATATTGCAAATCTTTGGATGAGTTCCCTCAGAATGGAGCAACAATTGTCCACTGGATAAAAAAGgtttgtccagcttctgttgttccctgtgtatgttcatgttaaactctcaattccaacatgttgtttgttttccag
species | Zea mays |
transcript | GRMZM2G121223_T03 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGGATGAGTTCCCTCAGAATGGAGCAACAATTGTCCACTGGATAAAAAAG TTCCCGTTCTTTTGCAGTGACCGTGAEST: gi|71772130|gb|DR970067.1|DR970067
genomic: TGGATGAGTTCCCTCAGAATGGAGCAACAATTGTCCACTGGATAAAAAAGgtttgtccag ... tgttttccagTTCCCGTTCTTTTGCAGTGACCGTGA
EST: TGGATGAGTTCCCTCAGAATGGAGCAACAATTGTCCACTGGATAAAAAAG TTCCCGTTCTTTTGCAGTGACCGTGAATACATCTTTGGAGGACGCATATEST: gi|148969662|gb|EE020526.2|EE020526
genomic: TGGATGAGTTCCCTCAGAATGGAGCAACAATTGTCCACTGGATAAAAAAGgtttgtccag ... tgttttccagTTCCCGTTCTTTTGCAGTGACCGTGAATACATCTTTGGAGGACGCATAT
EST: TGGATGAGTTCCCTCAGAATGGAGCAACAATTGTCCACTGGATAAAAAAG TTCCCGTTCTTTTGCAGTGACCGTGAATACATCTTTGGAGGACGCATATGGEST: gi|71433771|gb|DR814821.1|DR814821
genomic: TGGATGAGTTCCCTCAGAATGGAGCAACAATTGTCCACTGGATAAAAAAGgtttgtccag ... tgttttccagTTCCCGTTCTTTTGCAGTGACCGTGAATACATCTTTGGAGGACGCATATGG
EST: TGGATGAGTTCCCTCAGAATGGAGCAACAATTGTCCACTGGATAAAAA-G TTCCCGTTCTTTTGCAGTGACCGTGAATACATCTTTGGAGGEST: gi|32796043|gb|CD948279.1|CD948279
genomic: TGGATGAGTTCCCTCAGAATGGAGCAACAATTGTCCACTGGATAAAAAAGgtttgtccag ... tgttttccagTTCCCGTTCTTTTGCAGTGACCGTGAATACATCTTTGGAGG
EST: TGGATGAGTTCCCTCAGAATGGAGCAACAATTGTCCACTGGAT-AAAAAG TTCCCGTTCTTTTGCAGTGACCGTGAATACATCTTTGGAGGACGCATATGG
genomic: TGGATGAGTTCCCTCAGAATGGAGCAACAATTGTCCACTGGATAAAAAAGgtttgtccag ... tgttttccagTTCCCGTTCTTTTGCAGTGACCGTGAATACATCTTTGGAGGACGCATATGG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGTGATTTTCGTCTAAAGTGGGATCCCATGCTTGCATATTGCAAATCTTTGGATGAGTTCCCTCAGAATGGAGCAACAATTGTCCACTGGATAAAAAAGgtttgtccagcttctgttgttccctgtgtatgttcatgttaaactctcaattccaacatgttgtttgttttccag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA