1 5' 3' | 2 5' 3' | 3 5' 3' |
GAAGGTGCTCGCCGAGGTCGAGGAGCTCCATCTAAGCATAATCCATGCCAACGTCCTGCCCTTCGTAGAGGGCACTCTCATCATAACCATCACGGCAAAGgcaagtttttttttactgaccagtctttttacaagaaaaaggaacttgttttggtatattccactgcccacagttaggaaagttttgaacttttgatggt...
species | Zea mays |
transcript | GRMZM2G120021_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACGTCCTGCCCTTCGTAGAGGGCACTCTCATCATAACCATCACGGCAAAG GTGGAGGAGGGCTTTACCGTATCTGCGGGGGAGATCGTTGGCAGACTCAACEST: gi|110223058|gb|EC904956.1|EC904956
genomic: ACGTCCTGCCCTTCGTAGAGGGCACTCTCATCATAACCATCACGGCAAAGgcaagttttt ... gtttgatcagGTGGAGGAGGGCTTTACCGTATCTGCGGGGGAGATCGTTGGCAGACTCAAC
EST: ACGTCCTGCCCTTCGTAGAGGGCACTCTCATCATAACCATCACGGCAAAG GTGGAGGAGGGCTTTACCGTATTTGCGGGGGAGATCGTTGGCAGACTCAAC
genomic: ACGTCCTGCCCTTCGTAGAGGGCACTCTCATCATAACCATCACGGCAAAGgcaagttttt ... gtttgatcagGTGGAGGAGGGCTTTACCGTATCTGCGGGGGAGATCGTTGGCAGACTCAAC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAAGGTGCTCGCCGAGGTCGAGGAGCTCCATCTAAGCATAATCCATGCCAACGTCCTGCCCTTCGTAGAGGGCACTCTCATCATAACCATCACGGCAAAGgcaagtttttttttactgaccagtctttttacaagaaaaaggaacttgttttggtatattccactgcccacagttaggaaagttttgaacttttgatggt
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - aagaaaaa