1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TATGTTCCCGCGTGGTGCTGATGCCTACATAGATGACATCAATAAGCTCATCTCGTTATCAGATGGGAAGATCAGGACGGCTGTTGACACAGGTTGCGGGgtaagtggaaggacaccttggtgggtctaggttctagatttgcgttgtgatagtgctgatgcttttgctgttgaag
species | Zea mays |
transcript | GRMZM2G114570_T04 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CTCCGT-ATCAGATGGGGAGATCAGGACGGCTGTTGACACAGGTTGCGGG GTTGCTAGTTGGGGAGCTTACTTGCTGEST: gi|71445088|gb|DR826138.1|DR826138
genomic: CTC-GTTATCAGATGGGAAGATCAGGACGGCTGTTGACACAGGTTGCGGGgtaagtggaa ... gctgttgaagGTTGCTAGTTGGGGAGCTTACTTGCTG
EST: CTCGTTATCAGATGGGAAGATCAGGGACG-CTGTTGACACAGGTTGCGGG GGTGCTAGTTGGGGAGCTTACTTGCTGGAGAGAAACAT
genomic: CTCGTTATCAGATGGGAAGATCAGG-ACGGCTGTTGACACAGGTTGCGGGgtaagtggaa ... gctgttgaagGTTGCTAGTTGGGGAGCTTACTTGCTGAAGAGAAACAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TATGTTCCCGCGTGGTGCTGATGCCTACATAGATGACATCAATAAGCTCATCTCGTTATCAGATGGGAAGATCAGGACGGCTGTTGACACAGGTTGCGGGgtaagtggaaggacaccttggtgggtctaggttctagatttgcgttgtgatagtgctgatgcttttgctgttgaag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGATG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGATCA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT