1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CCTGGACCCCGAGACGGGGTAATCCAATGTTTCATAAAAAGGGACAAATCAAAGCTAACGTACCGGCTCTACTTGTCCCTTAGCTCTGgtaagtgtcaacctattgtcttcacttcagaataacaaagtcaatagtcttttgtttgtttgttgaaactcatgtctgtcccatcagttttcaattttgt...
species | Zea mays |
transcript | GRMZM2G108228_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: ACCGGCTCTACTTGTCCCTTAGCTCTG GTGTGCTTGATGAGAACGGGAAGTTCCTGCTAGCAGCGAAAAGGAGCCGCAEST: gi|30087730|gb|CB885936.1|CB885936
genomic: ACCGGCTCTACTTGTCCCTTAGCTCTGgtaagtgtca ... gatcttgtagGTGTGCTTGATGAGAACGGGAAGTTCCTGCTAGCAGCGAAAAGGAGCCGCA
EST: AAGGGACAAATCAAAGCTAACGTACCGGCTCTACTTGTCCCTTAGCTCTG GTGTGCTTGATGAGAACGGGAAGTTCCTGCTAGCAGCGAAAAGGAGCCGCAEST: gi|32843854|gb|CD983535.1|CD983535
genomic: AAGGGACAAATCAAAGCTAACGTACCGGCTCTACTTGTCCCTTAGCTCTGgtaagtgtca ... gatcttgtagGTGTGCTTGATGAGAACGGGAAGTTCCTGCTAGCAGCGAAAAGGAGCCGCA
EST: TACCGGCTCTACTTGTCCCTTAGCTCTG GTGTGCTTGATGAGAACGGGAAGTTCCTGCTAGCAGCGAAAAGGAGCCGCAEST: gi|78111744|gb|DV530141.1|DV530141
genomic: TACCGGCTCTACTTGTCCCTTAGCTCTGgtaagtgtca ... gatcttgtagGTGTGCTTGATGAGAACGGGAAGTTCCTGCTAGCAGCGAAAAGGAGCCGCA
EST: AAGGGACAAATCAAAGCTAACGTACCGGCTCTACTTGTCCCTTAGCTCTG GTGTGCTTGATGAGAACGGGAAGTTCCTGCTAGCAGCGAAAAGGAGCCGCA
genomic: AAGGGACAAATCAAAGCTAACGTACCGGCTCTACTTGTCCCTTAGCTCTGgtaagtgtca ... gatcttgtagGTGTGCTTGATGAGAACGGGAAGTTCCTGCTAGCAGCGAAAAGGAGCCGCA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CCTGGACCCCGAGACGGGGTAATCCAATGTTTCATAAAAAGGGACAAATCAAAGCTAACGTACCGGCTCTACTTGTCCCTTAGCTCTGgtaagtgtcaacctattgtcttcacttcagaataacaaagtcaatagtcttttgtttgtttgttgaaactcatgtctgtcccatcagttttcaattttgt
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