1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' | 9 5' 3' |
CATGTGGGTGCGGAAGTGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAGgtatcctctattttctctctctttaatctcggttatgattgcacagtttgtaatggtctgtttgttgaaaccctaaaattatctcgttgcttgccgtaacaaatggag
species | Zea mays |
transcript | GRMZM2G102475_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAG GTTGATGGCGCTGAAAATAATGAAGAAGGCACAAAGGATGCCAATGGGGAGEST: gi|148955907|gb|EC901617.2|EC901617
genomic: TGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAGgtatcctcta ... acaaatggagGTTGATGGCGCTGAAAATAATGAAGAAGGCACAAAGGATGCCAATGGGGAG
EST: TGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAG GTTGATGGCGCTGAAAATAATGAAGAAGGCACAAAGGATGCCAATGGGGAGEST: gi|148953283|gb|EE152769.2|EE152769
genomic: TGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAGgtatcctcta ... acaaatggagGTTGATGGCGCTGAAAATAATGAAGAAGGCACAAAGGATGCCAATGGGGAG
EST: TGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAG GTTGATGGCGCTGAAAATAATGAAGAAGGCACAAAGGATGCCAATGGGGAGEST: gi|149026687|gb|EE046096.2|EE046096
genomic: TGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAGgtatcctcta ... acaaatggagGTTGATGGCGCTGAAAATAATGAAGAAGGCACAAAGGATGCCAATGGGGAG
EST: TGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAG GTTGATGGCGCTGAAAATAATGAAGAAGGCACAAAGGATGCCAATGGGGAGEST: gi|93013768|gb|EB639288.1|EB639288
genomic: TGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAGgtatcctcta ... acaaatggagGTTGATGGCGCTGAAAATAATGAAGAAGGCACAAAGGATGCCAATGGGGAG
EST: TGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAG GTTGATGGCGCTGAAAATAATGAAGAAGGCACAAAGGATGCCAATGGGGAGEST: gi|149045935|gb|EE047933.2|EE047933
genomic: TGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAGgtatcctcta ... acaaatggagGTTGATGGCGCTGAAAATAATGAAGAAGGCACAAAGGATGCCAATGGGGAG
EST: TGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAG GTTGATGGCGCTGAAAATAATGAAGAAGGCACAAAGGATGCCAATGGGGAG
genomic: TGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAGgtatcctcta ... acaaatggagGTTGATGGCGCTGAAAATAATGAAGAAGGCACAAAGGATGCCAATGGGGAG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATGTGGGTGCGGAAGTGGCGGATCAGGCTCCGCAGAAGCGTCGGCTGCTATCGGCCGTAGTTAAGgtatcctctattttctctctctttaatctcggttatgattgcacagtttgtaatggtctgtttgttgaaaccctaaaattatctcgttgcttgccgtaacaaatggag
- - - - - - - - - - - - - - - - - AGAAGC
- - - - - - - - - - - - - - - - - - - - - - GCTGCT