1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CATGACCTGATGCACCCCGTGAAGACCGACTCGTCGTTCTGGACAATAGgtgtggccgaactcatcgctcttgagcacctcatcattttttttcttctaaaccacaccttttctttttctgagcctgtactgtagatattgatttctgt...
species | Zea mays |
transcript | GRMZM2G098857_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CATGACCTGATGCACCCCGTGAAGACCGACTCGTCGTTCTGGACAATAG AGGATGCTGAGATGCATATAACACTGCAAAAAAGAGAGAAGGGGAAAACATEST: gi|211386706|gb|FL471342.1|FL471342
genomic: CATGACCTGATGCACCCCGTGAAGACCGACTCGTCGTTCTGGACAATAGgtgtggccga ... gacaatacagAGGATGCTGAGATGCATATAACACTGCAAAAAAGAGAGAAGGGGAAAACAT
EST: GCATGACCTGATGCACCCCGTGAAGACCGACTCGTCGTTYTGGMCAATAG AGGATGCTGAGATGCATATAACMCTGCAAAAAAGAGAGAAGGGGAAAACATEST: gi|211371835|gb|FL183022.1|FL183022
genomic: GCATGACCTGATGCACCCCGTGAAGACCGACTCGTCGTTCTGGACAATAGgtgtggccga ... gacaatacagAGGATGCTGAGATGCATATAACACTGCAAAAAAGAGAGAAGGGGAAAACAT
EST: CATGACCTGATGCACCCCGTGAAGACCGACTCGTCGTTCTGGACAATAG AGGATGCTGAGATGCATATAACACTGCAAAAAAGAGAGAAGGGGAAAACATEST: gi|211333562|gb|FL462825.1|FL462825
genomic: CATGACCTGATGCACCCCGTGAAGACCGACTCGTCGTTCTGGACAATAGgtgtggccga ... gacaatacagAGGATGCTGAGATGCATATAACACTGCAAAAAAGAGAGAAGGGGAAAACAT
EST: CATGACCTGATGCACCCCGTGAAGACCGACTCGTCGTTNYTGGACAATAG AGGATGCTGAGATGCATATAACMCTGCAAAAAAGAGAGAAGGGGAAAACAT
genomic: CATGACCTGATGCACCCCGTGAAGACCGACTCGTCGTT-CTGGACAATAGgtgtggccga ... gacaatacagAGGATGCTGAGATGCATATAACACTGCAAAAAAGAGAGAAGGGGAAAACAT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CATGACCTGATGCACCCCGTGAAGACCGACTCGTCGTTCTGGACAATAGgtgtggccgaactcatcgctcttgagcacctcatcattttttttcttctaaaccacaccttttctttttctgagcctgtactgtagatattgatttctgt
- - - - - - - - - TGAAGA