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GCAGCCTGTGATGAAACGTCAGAGAAATCAGAACGGGCGTTTGTCCAACTATTATTGACTTCATCTAGTGGAAATAGTAATAACGAGgtcttttctctttctttgaattctaaacatgagtcaacatatagtggggcatagaatgacaatttcatagggattatgctctcctttcctatgctgacat...
species | Zea mays |
transcript | GRMZM2G098815_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CGTTTGTCCAACTATTATTGACTTCATCTAGTGGAAATAGTAATAACGAG GTCCTGAATCAGTCTGCCCTTGATTACATAAATGGATCTGTTTCAGCATCTEST: gi|71449728|gb|DR830778.1|DR830778
genomic: CGTTTGTCCAACTATTATTGACTTCATCTAGTGGAAATAGTAATAACGAGgtcttttctc ... tgtttctcagGTCCTGAATCAGTCTGCCCTTGATTACATAAATGGATCTGTTTCAGCATCT
EST: CGTTTGTCCAACTATTATTGACTTCATCTAGTGGAAATAGTAATAACGAG GTCCTGAATCAGTCTGCCCTTGATTACATAAATGGATCTGTTTCAGCATCTEST: gi|149082609|gb|EE171808.2|EE171808
genomic: CGTTTGTCCAACTATTATTGACTTCATCTAGTGGAAATAGTAATAACGAGgtcttttctc ... tgtttctcagGTCCTGAATCAGTCTGCCCTTGATTACATAAATGGATCTGTTTCAGCATCT
EST: CGTTTGTCCAACTATTATTGACTTCATCTAGTGGAAATAGTAATAACGAG GTCCTGAATCAGTCTGCCCTTGATTACATAAATGGATCTGTTTCAGCATCTEST: gi|89253146|gb|DY624932.1|DY624932
genomic: CGTTTGTCCAACTATTATTGACTTCATCTAGTGGAAATAGTAATAACGAGgtcttttctc ... tgtttctcagGTCCTGAATCAGTCTGCCCTTGATTACATAAATGGATCTGTTTCAGCATCT
EST: CGTTTGTCCAACTATTATTGACTTCATCTAGTGGAAATAGTAATAACGAG GTCCTGAATCAGTCTGCCCTTGATTACATAAATGGATCTGTTTCAGCATCTEST: gi|211052434|gb|FL214545.1|FL214545
genomic: CGTTTGTCCAACTATTATTGACTTCATCTAGTGGAAATAGTAATAACGAGgtcttttctc ... tgtttctcagGTCCTGAATCAGTCTGCCCTTGATTACATAAATGGATCTGTTTCAGCATCT
EST: CGTTTGTCCAACTATTATTGACTTCATCTAGTGGAAATAGTAATAACGAG GTCCTGAATCAGTCTGCCCTTGATTACATAAATGGATCTGTTTCAGCATCT
genomic: CGTTTGTCCAACTATTATTGACTTCATCTAGTGGAAATAGTAATAACGAGgtcttttctc ... tgtttctcagGTCCTGAATCAGTCTGCCCTTGATTACATAAATGGATCTGTTTCAGCATCT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCAGCCTGTGATGAAACGTCAGAGAAATCAGAACGGGCGTTTGTCCAACTATTATTGACTTCATCTAGTGGAAATAGTAATAACGAGgtcttttctctttctttgaattctaaacatgagtcaacatatagtggggcatagaatgacaatttcatagggattatgctctcctttcctatgctgacat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGTGGA