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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CTCGGACCTGCGGATCAGTTGGATTCTCAAGGGAGACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTCgtactgcctcaaatctctattgtcggttttgtatgcggggaacttcgtacacgatccttatcatatgagctgttttaatgtttcgcag

Basic information

species Zea mays
transcript GRMZM2G095727_T03
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|67028242|gb|CO456991.1|CO456991
EST:     GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTC                         GAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
genomic: GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTCgtactgcctc ... tgtttcgcagGAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
EST: gi|78086698|gb|DV515091.1|DV515091
EST:     GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTC                         GAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
genomic: GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTCgtactgcctc ... tgtttcgcagGAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
EST: gi|31441071|gb|CD510502.1|CD510502
EST:     GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTC                         GAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
genomic: GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTCgtactgcctc ... tgtttcgcagGAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
EST: gi|89252032|gb|DY623818.1|DY623818
EST:     GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTC                         GAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
genomic: GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTCgtactgcctc ... tgtttcgcagGAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
EST: gi|94478976|gb|EB707934.1|EB707934
EST:     GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTC                         GAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
genomic: GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTCgtactgcctc ... tgtttcgcagGAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
EST: gi|71432179|gb|DR813229.1|DR813229
EST:     GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTC                         GAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
genomic: GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTCgtactgcctc ... tgtttcgcagGAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
EST: gi|211378749|gb|FL130659.1|FL130659
EST:     GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTC                         GAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA
genomic: GACGGTGGTTTCTGATTTCCTTTCTCTAAGCATACCAAATCCTTTGTCTCgtactgcctc ... tgtttcgcagGAGTCGGGAGCAACTGGTTTTGGGCGTCGCGGAGCACATGGCTTAAGAATA