Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   		6  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

CCCGGCGTCCGTGAAGATCCAGCTGATACACAAGCTGGTCGGCGCGGGCCTGTCGGTTGTCGAGGCCACCAGCTTCGTCTCCCCAAAGTGGGTGCCGCAGgtgacgtgcatgtagcctactaccatagtgccatggctcttccatggaaaaaaaaggtcatcaagttcttatctagcacagtacgtttggcaactgcag

Basic information

species Zea mays
transcript GRMZM2G095141_T01
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|31612150|gb|CD568772.1|CD568772
EST:     TGTCGGTTGTCGAGGCCACCAGCTTCGTCTCCCCAAAGTGGGTGCCGCAG                         CTAGCCGACGCAGAGGAGGTGCTGAAGGGTATAAAGCAGGAGCCAGGCGTG
genomic: TGTCGGTTGTCGAGGCCACCAGCTTCGTCTCCCCAAAGTGGGTGCCGCAGgtgacgtgca ... gcaactgcagCTAGCCGACGCAGAGGAGGTGCTGAAGGGTATAAAGCAGGAGCCAGGCGTG
EST: gi|31998618|gb|CD662163.1|CD662163
EST:     TGTCGGTTGTCGAGGCCACCAGCTTCGTCTCCCCAAAGTGGGTGCCGCAG                         CTAGCCGACGCAGAGGAGGTGCTGAAGGGTATAAAGCAGGAGCCAGGCGTG
genomic: TGTCGGTTGTCGAGGCCACCAGCTTCGTCTCCCCAAAGTGGGTGCCGCAGgtgacgtgca ... gcaactgcagCTAGCCGACGCAGAGGAGGTGCTGAAGGGTATAAAGCAGGAGCCAGGCGTG