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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacatacaaacactttctttatgttatcctgaacaaatcttggttatctaattcacctaaaatgctcatctgtgaaacag

Basic information

species Zea mays
transcript GRMZM2G089454_T01
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G089454_T01 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os02g49980.2 (Oryza sativa), 5'ss of exon 3
ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacatacaaacactttctttatgttatcctgaacaaatcttg--gttatctaattcacctaa--aatgctcatctgt-----gaaacag-
|||||||||||||| || ||||||||||||||||||||||||||  |   |||  |   | |||   || | |  |  |   | ||||||||| |||| |   || ||  ||  |     |||||   
ACAGGTGGCTACAGCGAAGACATGATTCCAACTgtatgtacatatcactgcttcttaagtcttaatttgtagaggtagtattgctatctaattgacctgacttatacttgtccatattctgaaaccag

upper sequence: GRMZM2G089454_T01 (Zea mays), 5'ss of exon 3
lower sequence: GLYMA14G39540.1 (Glycine max), 5'ss of exon 3
ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacatacaaacactttctttatgttatcctgaacaaatcttggttatctaattcacctaaa-atgctcatctgtgaaacag---------------------------
|| || ||||||||||||||||||||||||||||| ||||  ||      |||| || ||   ||| ||||    | |||  ||| | ||     | |  ||| |   || || ||  |                           
ACTGGGGGCTACAGTGAGGACATGATTCCAACTgtgtgtatctagctttgcttt-ttgattgaatcttgaat---tgttgcatatttgatgattgtgagcatgtttgcctttgtaattgaaatataattcttggtgttaaacgcag

upper sequence: GRMZM2G089454_T01 (Zea mays), 5'ss of exon 3
lower sequence: GLYMA02G41170.1 (Glycine max), 5'ss of exon 3
ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacatacaaacactttctttatgttatcctgaacaaatcttggttatctaattcacctaaaatgctcatctgtgaaacag---------------------------
|| || ||||||||||||||||||||||||||||| ||||  ||      |||| || ||   ||| ||||    |    |||     |||     |  ||| |   || || ||  |                           
ACTGGGGGCTACAGTGAGGACATGATTCCAACTgtgtgtatctatctttgcttt-ttgattgcatcttgaatggttacatgtttgaagatt--gtgagcatgtttgcctttgtaattgaaatataattcttggtgttaaacccag

upper sequence: GRMZM2G089454_T01 (Zea mays), 5'ss of exon 3
lower sequence: Vv14s0006g01090.t01 (Vitis vinifera), 5'ss of exon 4
ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacatacaaacactttc----tttatgttatcctgaacaaatcttggttatctaat---tcacctaaaatgctcatctgtga--aacag
||||| |||||||||||||||||||||||||||||| |||  |  |  |    |     |  || | |   || |  |  ||| ||| |   ||   | | |    || ||   || |||  |||||
ACAGGAGGCTACAGTGAGGACATGATTCCAACTgtaggtatctttatccggggttaaattgaatttcacattgtatgatccttagttcttagatatcttatcagggattcttggctctgacaaacag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211065338|gb|FL151744.1|FL151744
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065340|gb|FL151746.1|FL151746
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065346|gb|FL151752.1|FL151752
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065347|gb|FL151753.1|FL151753
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211078877|gb|FL255316.1|FL255316
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211518201|gb|FL151739.1|FL151739
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAG-CTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211210689|gb|FL096715.1|FL096715
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAG-CTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAAT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAAT
EST: gi|211073404|gb|FL255297.1|FL255297
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGG-CTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACT
EST: gi|211518202|gb|FL151740.1|FL151740
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211518193|gb|FL151731.1|FL151731
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTA-GCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211518192|gb|FL151730.1|FL151730
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAG-CTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211078878|gb|FL255317.1|FL255317
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211518204|gb|FL151742.1|FL151742
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACT                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211518190|gb|FL151728.1|FL151728
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211518196|gb|FL151734.1|FL151734
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211068105|gb|FL151761.1|FL151761
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTA-GCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211518199|gb|FL151737.1|FL151737
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065349|gb|FL151755.1|FL151755
EST:     ACAGGTGGCTACAGTGAGGACATGGTTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|60338272|gb|DN205245.1|DN205245
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACT                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211068106|gb|FL151762.1|FL151762
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCYTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211076131|gb|FL255301.1|FL255301
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065345|gb|FL151751.1|FL151751
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211518200|gb|FL151738.1|FL151738
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065350|gb|FL151756.1|FL151756
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211518197|gb|FL151735.1|FL151735
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTA-GCTTCAATATGTGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211518203|gb|FL151741.1|FL151741
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211078881|gb|FL255320.1|FL255320
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065343|gb|FL151749.1|FL151749
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACT                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065342|gb|FL151748.1|FL151748
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065351|gb|FL151757.1|FL151757
EST:     ACAGGTGGCTACAGTGAGGACATTATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211033084|gb|FL322683.1|FL322683
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065341|gb|FL151747.1|FL151747
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065344|gb|FL151750.1|FL151750
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211068102|gb|FL151758.1|FL151758
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065339|gb|FL151745.1|FL151745
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211068103|gb|FL151759.1|FL151759
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211068104|gb|FL151760.1|FL151760
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211518195|gb|FL151733.1|FL151733
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211518194|gb|FL151732.1|FL151732
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|58029961|gb|CX725388.1|CX725388
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACT                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
EST: gi|211065348|gb|FL151754.1|FL151754
EST:     ACAGGTGGCTACAGTGAGGACATGATTCCAACC                         GTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT
genomic: ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTT

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 47 (upstream exon), 48 (downstream exon)
Score: 128

ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTTTGGGATCTTGGTGGGCAACGAAGATTCCGCACTATGTGGGAGCGCTACT


Block sizes: 49 (upstream exon), 48 (downstream exon)
Score: 145

ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTTTGGGATCTTGGTGGGCAACGAAGATTCCGCACTATGTGGGAGCGCTACT


Block sizes: 48 (upstream exon), 48 (downstream exon)
Score: 57

ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTTTGGGATCTTGGTGGGCAACGAAGATTCCGCACTATGTGGGAGCGCTACT


Block sizes: 47 (upstream exon), 48 (downstream exon)
Score: 52

ACAGGTGGCTACAGTGAGGACATGATTCCAACTgtatgtacat ... tgtgaaacagGTAGGCTTCAATATGCGGAAAATCACCAAGGGGAATGTCACAATTAAACTTTGGGATCTTGGTGGGCAACGAAGATTCCGCACTATGTGGGAGCGCTACT