1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
AGCACCGCAACATCATGAAGTTCTACACCTCCTGGGTCGACGTCTCCCGCCGCAACATCAACTTCATCACCGAGATGTTCACCTCCGGCACCCTCCGCCAgtaagcgaccaacctcctccgcacctgtatcgcctaaaagttgttgcggccttttcagattattttctctctctctctctctctctctctctctctctct...
species | Zea mays |
transcript | GRMZM2G089159_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CGCAACATCAACTTCATCACCGAGATGTTCACCTCCGGCACCCTCCGCCA GTACCGGCAGAGGCACCGGAGGGTGAACATATGGGCGGTGAAGCACTGGTGEST: gi|71445292|gb|DR826342.1|DR826342
genomic: CGCAACATCAACTTCATCACCGAGATGTTCACCTCCGGCACCCTCCGCCAgtaagcgacc ... gatgatttagGTACCGGCAGAGGCACCGGAGGGTGAACATATGGGCGGTGAAGCACTGGTG
EST: CGCAACATCAACTTCATCACCGAGATGTTCACCTCCGGCACCCTCCGCCA GTACCGGCAGAGGCACCGGAGGGTGAACATATGGGCGGTGAAGCACTGGTGEST: gi|94477446|gb|EB706404.1|EB706404
genomic: CGCAACATCAACTTCATCACCGAGATGTTCACCTCCGGCACCCTCCGCCAgtaagcgacc ... gatgatttagGTACCGGCAGAGGCACCGGAGGGTGAACATATGGGCGGTGAAGCACTGGTG
EST: CGCAACATCAACTTCATCACCGAGATGTTCACCTCCGGCACCCTCCGCCA GTACCGGCAGAGGCACCGGAGGGTGAACATATGGGCGGTGAAGCACTGGTGEST: gi|71418334|gb|DR804408.1|DR804408
genomic: CGCAACATCAACTTCATCACCGAGATGTTCACCTCCGGCACCCTCCGCCAgtaagcgacc ... gatgatttagGTACCGGCAGAGGCACCGGAGGGTGAACATATGGGCGGTGAAGCACTGGTG
EST: CGCAACATCAACTTCATCACCGAGATGTTCACCTCCGGCACCCTCCGCCA GTACCGGCAGAGGCACCGGAGGGTGAACATATGGGCGGTGAAGCACTGGTG
genomic: CGCAACATCAACTTCATCACCGAGATGTTCACCTCCGGCACCCTCCGCCAgtaagcgacc ... gatgatttagGTACCGGCAGAGGCACCGGAGGGTGAACATATGGGCGGTGAAGCACTGGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AGCACCGCAACATCATGAAGTTCTACACCTCCTGGGTCGACGTCTCCCGCCGCAACATCAACTTCATCACCGAGATGTTCACCTCCGGCACCCTCCGCCAgtaagcgaccaacctcctccgcacctgtatcgcctaaaagttgttgcggccttttcagattattttctctctctctctctctctctctctctctctctct
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