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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

AGTTTATCCAGACTGCCATGGGGATCAAAAGTGGCTACTAGCAGCGGGGAGAACATCGATTCAGCAATAAGCATTCCAACTCTTCAACTGTATGAGTTTGgtaaaacaataaattctgtttacctatggtcgtaggctgctgcttctggtttctgcaatatactgattgaatcctttgttattgttccaaag

Basic information

species Zea mays
transcript GRMZM2G086971_T03
intron # 3
splice site 5'
intron type U2

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|94477967|gb|EB706925.1|EB706925
EST:     GAACATCGATTCAGCAATAAGCATTCCAACTCTTCAACTGTATGAGTTTG                         AGGCATGTCCCTTCTGTAGGAGAGTTCGGGAGGCCATGACCGACCTTGACC
genomic: GAACATCGATTCAGCAATAAGCATTCCAACTCTTCAACTGTATGAGTTTGgtaaaacaat ... tgttccaaagAGGCATGTCCCTTCTGTAGGAGAGTTCGGGAGGCCATGACCGAGCTTGACC
EST: gi|76012729|gb|DT939899.1|DT939899
EST:     GAACATCGATTCAGCAATAAGCATTCCAACTCTTCAACTGTATGAGTTTG                         AGGCATGTCCCTTCTGTAGGAGAGTTCGGGAGGCCATGACCGAGCTTGACC
genomic: GAACATCGATTCAGCAATAAGCATTCCAACTCTTCAACTGTATGAGTTTGgtaaaacaat ... tgttccaaagAGGCATGTCCCTTCTGTAGGAGAGTTCGGGAGGCCATGACCGAGCTTGACC