Skip to another splice site:
1  
 5'  3'   		2  
 5'  3'   		3  
 5'  3'   		4  
 5'  3'   		5  
 5'  3'   

Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

ATAAGGAACAGGAAAAGACCAAGCGTGAACGCAAAACAACAAAATACATGACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataattttgagtgttgaacatgtaaaaaacctatcttccaacctaatactaaccttagtctttttgcag

Basic information

species Zea mays
transcript GRMZM2G086904_T01
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G086904_T01 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os03g38960.1 (Oryza sativa), 5'ss of exon 3
ATAAGGAACAGGAAAAGACCAAGCGTGAACGCAAAACAACAAAATACATGACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataattttgagtgttgaac-atgtaaaaaacctatcttccaacctaata-ctaaccttagtctttttgcag--------------------
|||||||||| ||||| ||  ||||   |||||||||  |||| || ||||| ||||| || ||||| ||||||||||||||||| || || ||||||||||  ||  || |   | |   |      |  |   | |  ||     ||||||  | ||| ||   | ||   |                     
ATAAGGAACAAGAAAAAACTCAGCGCCCACGCAAAACGTCAAAGTATATGACAAAGTATGAGCGTGCCCGCATCCTGGGTACACGTGCATTACAGATAAGgt--atgtttctatatatcatattgcacagtattgccaatttgatggctaatagtttaccatacagtattaataacccttgctgttgttttatag
















Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211479823|gb|FL079091.1|FL079091
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211497131|gb|FL079176.1|FL079176
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|89756827|gb|DY686702.1|DY686702
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211132169|gb|FL066406.1|FL066406
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211202195|gb|FL066453.1|FL066453
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211500014|gb|FL079188.1|FL079188
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211132172|gb|FL066409.1|FL066409
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGG
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGG
EST: gi|32838705|gb|CD978386.1|CD978386
EST:     TACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: TACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211497141|gb|FL079186.1|FL079186
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|213173412|gb|FM186750.1|FM186750
EST:     GGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: GGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|60355492|gb|DN222465.1|DN222465
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|6431831|gb|AW172035.1|AW172035
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211491362|gb|FL079150.1|FL079150
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|60394107|gb|DN226977.1|DN226977
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211488472|gb|FL079130.1|FL079130
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211497133|gb|FL079178.1|FL079178
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|67033929|gb|CO462678.1|CO462678
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|67023915|gb|CO452664.1|CO452664
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|213191189|gb|FM195899.1|FM195899
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211356285|gb|FL079082.1|FL079082
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211199643|gb|FL066449.1|FL066449
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|60354164|gb|DN221137.1|DN221137
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211482713|gb|FL079106.1|FL079106
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|148949027|gb|EC894449.2|EC894449
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211482719|gb|FL079112.1|FL079112
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211482707|gb|FL079100.1|FL079100
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|60355890|gb|DN222863.1|DN222863
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|18176963|gb|BM378173.1|BM378173
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211485599|gb|FL079126.1|FL079126
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211494246|gb|FL079165.1|FL079165
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|60352015|gb|DN218988.1|DN218988
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211204767|gb|FL066468.1|FL066468
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211485591|gb|FL079118.1|FL079118
EST:     ACGAAGTACGAACGTGCGCGCATCCTGNGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211482708|gb|FL079101.1|FL079101
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGCGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211500015|gb|FL079189.1|FL079189
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211199632|gb|FL066438.1|FL066438
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211482718|gb|FL079111.1|FL079111
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211491367|gb|FL079155.1|FL079155
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|30087311|gb|CB885519.1|CB885519
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|33468145|gb|CF245194.1|CF245194
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|33467779|gb|CF244828.1|CF244828
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211479822|gb|FL079090.1|FL079090
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211199642|gb|FL066448.1|FL066448
EST:     ACGAAK-ACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211132178|gb|FL066415.1|FL066415
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211485597|gb|FL079124.1|FL079124
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|71317789|gb|DR795655.1|DR795655
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGACCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|13490631|gb|BG517395.1|BG517395
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|67030385|gb|CO459134.1|CO459134
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|37379391|gb|CF626441.1|CF626441
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|9824896|gb|BE574993.1|BE574993
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211133111|gb|FL066433.1|FL066433
EST:     ACGAAGTACGAACGTGCGCGCATCCTGTGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|60355684|gb|DN222657.1|DN222657
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211202205|gb|FL066463.1|FL066463
EST:     ACGAA-TACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211491361|gb|FL079149.1|FL079149
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211133107|gb|FL066429.1|FL066429
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211133106|gb|FL066428.1|FL066428
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211008098|gb|FL135922.1|FL135922
EST:     ACGAAKTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAAACTGACCCTCTTG
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAA-CTGACCCTCTTG
EST: gi|60349499|gb|DN216472.1|DN216472
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211497142|gb|FL079187.1|FL079187
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211491366|gb|FL079154.1|FL079154
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211479829|gb|FL079097.1|FL079097
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211494250|gb|FL079169.1|FL079169
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|13389425|gb|BG462716.1|BG462716
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|16918257|gb|BM073664.1|BM073664
EST:     CGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGAAT-AG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCATG
genomic: CGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAG-ATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTG
EST: gi|211479820|gb|FL079088.1|FL079088
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTNATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|26457622|gb|CA829205.1|CA829205
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211204768|gb|FL066469.1|FL066469
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211494252|gb|FL079171.1|FL079171
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211479827|gb|FL079095.1|FL079095
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211485595|gb|FL079122.1|FL079122
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211485590|gb|FL079117.1|FL079117
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211202199|gb|FL066457.1|FL066457
EST:     ACGAAGTACGAACGTGCGCGCATCCKGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCYCCAGTCATGGTTGAGCTTGAGGGARAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|33092908|gb|CF052902.1|CF052902
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|32908545|gb|CF013358.1|CF013358
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|20301294|gb|BQ164237.1|BQ164237
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211131248|gb|FL066400.1|FL066400
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|60337282|gb|DN204255.1|DN204255
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211488483|gb|FL079141.1|FL079141
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211491358|gb|FL079146.1|FL079146
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|60343431|gb|DN210404.1|DN210404
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211491357|gb|FL079145.1|FL079145
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|33467778|gb|CF244827.1|CF244827
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|40485863|gb|CK394777.1|CK394777
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTTATGGTTGAACTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|30087312|gb|CB885520.1|CB885520
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211482709|gb|FL079102.1|FL079102
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|32915187|gb|CF019999.1|CF019999
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|166447077|gb|EG196714.1|EG196714
EST:     ACGAAGT-CGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGA
EST: gi|32910381|gb|CF015193.1|CF015193
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211485589|gb|FL079116.1|FL079116
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|37374244|gb|CF623466.1|CF623466
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211008103|gb|FL135927.1|FL135927
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|211497138|gb|FL079183.1|FL079183
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGAGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|60340477|gb|DN207450.1|DN207450
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
EST: gi|16379488|gb|BI992976.1|BI992976
EST:     ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAG                         CATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA
genomic: ACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGA

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 788

ATAAGGAACAGGAAAAGACCAAGCGTGAACGCAAAACAACAAAATACATGACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG


Block sizes: 49 (upstream exon), 47 (downstream exon)
Score: 529

ATAAGGAACAGGAAAAGACCAAGCGTGAACGCAAAACAACAAAATACATGACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG


Block sizes: 49 (upstream exon), 49 (downstream exon)
Score: 590

ATAAGGAACAGGAAAAGACCAAGCGTGAACGCAAAACAACAAAATACATGACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG


Block sizes: 49 (upstream exon), 43 (downstream exon)
Score: 484

ATAAGGAACAGGAAAAGACCAAGCGTGAACGCAAAACAACAAAATACATGACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataatt ... ctttttgcagCATGAATGCTCCAGTCATGGTTGAGCTTGAGGGTGAAACTGACCCTCTTGAG


Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
ATAAGGAACAGGAAAAGACCAAGCGTGAACGCAAAACAACAAAATACATGACGAAGTACGAACGTGCGCGCATCCTGGGTACACGAGCCTTGCAGATAAGgttaataattttgagtgttgaacatgtaaaaaacctatcttccaacctaatactaaccttagtctttttgcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  GCAGAT