1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
GGTAACAGCGCTGGAAGTGGTTCGGCTCCAAAGAAGGCTAGGGTTCAGACCTCTTCTTCAGCACAGTCTACCCTAAAGgtttctccatctctctggagtctggagtgtatatacatgcccaccatttgttcatgcaatcttggaagaaacacggttctgatcacaccactggggacat...
species | Zea mays |
transcript | GRMZM2G083749_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CAAAGAAGGCTAGGGTTCAGACCTCTTCTTCAGCACAGTCTACCCTAAAG GTAAGAAAGGAGAGGCTTGGGGATAGAATCACTGCACTTCACCAGATAGTGEST: gi|50339291|gb|CO534417.1|CO534417
genomic: CAAAGAAGGCTAGGGTTCAGACCTCTTCTTCAGCACAGTCTACCCTAAAGgtttctccat ... gtttcatcagGTAAGAAAGGAGAGGCTTGGGGATAGAATCACTGCACTTCACCAGATAGTG
EST: CAAAGAAGGCTAGGGTTCAGACCTCTTCTTCAGCACAGTCTACCCTAAAG GTAAGAAAGGAGAGGCTTGEST: gi|94472188|gb|EB701146.1|EB701146
genomic: CAAAGAAGGCTAGGGTTCAGACCTCTTCTTCAGCACAGTCTACCCTAAAGgtttctccat ... gtttcatcagGTAAGAAAGGAGAGGCTTG
EST: CAAAGAAGGCTAGGGTTCAGACCTCTTCTTCAGCACAGTCTACCCTAAAG GGTA-GAAAGGAGAGGCTEST: gi|148981124|gb|EE027442.2|EE027442
genomic: CAAAGAAGGCTAGGGTTCAGACCTCTTCTTCAGCACAGTCTACCCTAAAGgtttctccat ... gtttcatcagG-TAAGAAAGGAGAGGCT
EST: CAAAGAAGGCTAGGGTTCAGACCTCTTCTTCAGCACAGTCTACCCTAAAG GTAAGAAAGGAGAGGCTTGGGGATAGAATCACTGCACTTCACCAGATAGTGEST: gi|149095094|gb|EE180702.2|EE180702
genomic: CAAAGAAGGCTAGGGTTCAGACCTCTTCTTCAGCACAGTCTACCCTAAAGgtttctccat ... gtttcatcagGTAAGAAAGGAGAGGCTTGGGGATAGAATCACTGCACTTCACCAGATAGTG
EST: CAAAGAAGGCTAGGGTTCAGACCTCTTCTTCAGCACAGTCTACCCTAAAG GTAAGAGAGGAGAGGCTTGGGGATAGAATCACTGCACTTCACCAGATAGTG
genomic: CAAAGAAGGCTAGGGTTCAGACCTCTTCTTCAGCACAGTCTACCCTAAAGgtttctccat ... gtttcatcagGTAAGAAAGGAGAGGCTTGGGGATAGAATCACTGCACTTCACCAGATAGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGTAACAGCGCTGGAAGTGGTTCGGCTCCAAAGAAGGCTAGGGTTCAGACCTCTTCTTCAGCACAGTCTACCCTAAAGgtttctccatctctctggagtctggagtgtatatacatgcccaccatttgttcatgcaatcttggaagaaacacggttctgatcacaccactggggacat
- - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - AAGAAG