1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' | 8 5' 3' |
GCTGATGGTTCTGAAAATCAGCTCGAAGTTTGAACTGAGAAGATTCTGCCGTACTACTGGGGCTGTTGCAATTgtaagttgtgattcatcagatgtatttgttaccgtgtcatagtagcacactattctgattttggatttttttctctcaaatatag
species | Zea mays |
transcript | GRMZM2G083095_T04 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CGAAGTTTGAACTGAGAAGATTCTGCCGTACTACTGGGGCTGTTGCAATT TTGAAACTTAGCCAACCCAATGCGGATGAACTAGGGTATGCAGACTCTGTTEST: gi|60396537|gb|DN229406.1|DN229406
genomic: CGAAGTTTGAACTGAGAAGATTCTGCCGTACTACTGGGGCTGTTGCAATTgtaagttgtg ... tcaaatatagTTGAAACTTAGCCAACCCAATGCGGATGAACTAGGGTACGCAGACTCTGTT
EST: CGAAGTTTGAACTGAGAAGATTCTGCCGTACTACTGGGGCTGTTGCAATT TTGAAACTTAGCCAACCCAATGCGGATGAACTAGGGTACGCAGACTCTGTTEST: gi|24773918|gb|CA409172.1|CA409172
genomic: CGAAGTTTGAACTGAGAAGATTCTGCCGTACTACTGGGGCTGTTGCAATTgtaagttgtg ... tcaaatatagTTGAAACTTAGCCAACCCAATGCGGATGAACTAGGGTACGCAGACTCTGTT
EST: CGAAGTTTGAACTGAGAAGATTCTGCCGTACTACTGGGGCTGTTGCAATT TTGAAACTTAGCCAACCCAATGCGGATGAACTAGGGTACGCAGACTCTGTT
genomic: CGAAGTTTGAACTGAGAAGATTCTGCCGTACTACTGGGGCTGTTGCAATTgtaagttgtg ... tcaaatatagTTGAAACTTAGCCAACCCAATGCGGATGAACTAGGGTACGCAGACTCTGTT
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GCTGATGGTTCTGAAAATCAGCTCGAAGTTTGAACTGAGAAGATTCTGCCGTACTACTGGGGCTGTTGCAATTgtaagttgtgattcatcagatgtatttgttaccgtgtcatagtagcacactattctgattttggatttttttctctcaaatatag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGTT