1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GAACAGGCACGGCGACTTCTTCTCTGCCCTGCTCAAGGCTCAGCCGCAGTTCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcgagctattctcctgttaatatacatcagttagctccaaaggttgctgcgcccctctcctaacagctgtgttactatatgaccttttgcag
species | Zea mays |
transcript | GRMZM2G081462_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAGEST: gi|149097284|gb|EE183107.2|EE183107
genomic: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAG
EST: CCTNCA-TGACTGGGAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAGEST: gi|32849293|gb|CD988974.1|CD988974
genomic: CCT-CAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAG
EST: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTEST: gi|32849632|gb|CD989313.1|CD989313
genomic: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGT
EST: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAGEST: gi|76016942|gb|DT944112.1|DT944112
genomic: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAG
EST: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAGEST: gi|13562192|gb|BG550412.1|BG550412
genomic: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAG
EST: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAGEST: gi|32859055|gb|CD998736.1|CD998736
genomic: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAG
EST: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAGEST: gi|32849718|gb|CD989399.1|CD989399
genomic: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAG
EST: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTACEST: gi|213172608|gb|FM194596.1|FM194596
genomic: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGTAC
EST: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAGEST: gi|13558924|gb|BG550279.1|BG550279
genomic: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAG
EST: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAGEST: gi|211289648|gb|FL131016.1|FL131016
genomic: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAG
EST: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAGEST: gi|78107168|gb|DV525586.1|DV525586
genomic: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAG
EST: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAGEST: gi|32845408|gb|CD985089.1|CD985089
genomic: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGTACCTGAATGACTGCCAACGCACTGCATTCTATGAG
EST: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCG GTGTATGTGACCATGTA
genomic: TCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcga ... ccttttgcagGTGTATGTGACCATGTA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GAACAGGCACGGCGACTTCTTCTCTGCCCTGCTCAAGGCTCAGCCGCAGTTCCTCAATGACTGGAAGGCCAAGCTCTGGTCACGGTTCTTCTGCCTCTCGgtaatttcgagctattctcctgttaatatacatcagttagctccaaaggttgctgcgcccctctcctaacagctgtgttactatatgaccttttgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TGGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAAGCT