1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
GGAAAGGTATGCAGTTCAGAAAGACGAGAGCTTGTCAGAAATAAGGACGCAGCTCCTTCAGATTGAAAATCAGCAAAGCAGTTTACTGGATCTTCTCCAGgtagttttcctttattctgttggttcttatattttacacgtttctttcagaaataaataactattaactgctcacctgattactaagcttatatgagagg...
species | Zea mays |
transcript | GRMZM2G078725_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: AGCTCCTTCAGATTGAAAATCAGCAAAGCAGTTTACTGGATCTTCTCCAG AAATTTATGGGGAAGTCCGAGAACGGTATGCATTCTTTGGAGACAAGAGTGEST: gi|211332294|gb|FL399660.1|FL399660
genomic: AGCTCCTTCAGATTGAAAATCAGCAAAGCAGTTTACTGGATCTTCTCCAGgtagttttcc ... tatttatcagAAATTTATGGGGAAGTCCGAGAACGGTATGCGTTCTTTGGAGACAAGAGTG
EST: AGCTCCTTCAGATTGAAAATCAGCAAAGCAGTTTACTGGATCTTCTCCAG AAATTTATGGGGAAGTCCGAGAACGGTATGCATTCTTTGGAGACAAGAGTGEST: gi|60359683|gb|DN226656.1|DN226656
genomic: AGCTCCTTCAGATTGAAAATCAGCAAAGCAGTTTACTGGATCTTCTCCAGgtagttttcc ... tatttatcagAAATTTATGGGGAAGTCCGAGAACGGTATGCGTTCTTTGGAGACAAGAGTG
EST: AGCTCCTTCAGATTGAAAATCAGCAAAGCAGTTTACTGGATCTTCTCCAG AAATTTATGGGGAAGTCCGAGAACGGTATGCGTTCTTTGGAGACAAGAGTGEST: gi|28987541|gb|CB351685.1|CB351685
genomic: AGCTCCTTCAGATTGAAAATCAGCAAAGCAGTTTACTGGATCTTCTCCAGgtagttttcc ... tatttatcagAAATTTATGGGGAAGTCCGAGAACGGTATGCGTTCTTTGGAGACAAGAGTG
EST: AGCTCCTTCAGATTGAAAATCAGCAAAGCAGTTTACTGGATCTTCTCCAG AAATTTATGGGGAAGTCCGAGAACGGTATGCGTTCTTTGGAGACAAGAGTGEST: gi|15313848|gb|BI478985.1|BI478985
genomic: AGCTCCTTCAGATTGAAAATCAGCAAAGCAGTTTACTGGATCTTCTCCAGgtagttttcc ... tatttatcagAAATTTATGGGGAAGTCCGAGAACGGTATGCGTTCTTTGGAGACAAGAGTG
EST: AGCTCCTTCAGATTGAAAATCAGCAAAGCAGTTTACTGGATCTTCTCCAG AAATTTATGGGGAAGTCCGAGAACGGTATGCGTTCTTTGGAGACAAGAGTG
genomic: AGCTCCTTCAGATTGAAAATCAGCAAAGCAGTTTACTGGATCTTCTCCAGgtagttttcc ... tatttatcagAAATTTATGGGGAAGTCCGAGAACGGTATGCGTTCTTTGGAGACAAGAGTG
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| GGAAAGGTATGCAGTTCAGAAAGACGAGAGCTTGTCAGAAATAAGGACGCAGCTCCTTCAGATTGAAAATCAGCAAAGCAGTTTACTGGATCTTCTCCAGgtagttttcctttattctgttggttcttatattttacacgtttctttcagaaataaataactattaactgctcacctgattactaagcttatatgagagg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCAAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -gaaataaa