1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
AAACTTCGATCCAGTTCGCTACTCTGGTAGATGGTTTGAGGTAGCCTCGTTGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAGgtattgtaatacctgaaacatcaaacacattggagaggatatctgtagccaggatttttctccattatctaaaaaagaacatctctgtctgtgtgatgat...
species | Zea mays |
transcript | GRMZM2G073743_T03 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAG GGAGTGTATTCTTTTGAEST: gi|71439037|gb|DR820087.1|DR820087
genomic: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAGgtattgtaat ... ggaacttcagGGAGTGTATTCTTTTGA
EST: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAG GGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTCEST: gi|94478805|gb|EB707763.1|EB707763
genomic: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAGgtattgtaat ... ggaacttcagGGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTC
EST: TGAAACGT-GATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAG GGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTCEST: gi|78106740|gb|DV525158.1|DV525158
genomic: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAGgtattgtaat ... ggaacttcagGGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTC
EST: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAG GGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTCEST: gi|74232047|gb|DT639961.1|DT639961
genomic: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAGgtattgtaat ... ggaacttcagGGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTC
EST: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAG GGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTCEST: gi|71767545|gb|DR965482.1|DR965482
genomic: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAGgtattgtaat ... ggaacttcagGGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTC
EST: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAG GGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTCEST: gi|71438402|gb|DR819452.1|DR819452
genomic: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAGgtattgtaat ... ggaacttcagGGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTC
EST: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAG GGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTCEST: gi|211332850|gb|FL425056.1|FL425056
genomic: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAGgtattgtaat ... ggaacttcagGGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTC
EST: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAG GGAGTGTATTCTTEST: gi|50336285|gb|CO531411.1|CO531411
genomic: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAGgtattgtaat ... ggaacttcagGGAGTGTATTCTT
EST: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAG GGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTCEST: gi|78117617|gb|DV536004.1|DV536004
genomic: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAGgtattgtaat ... ggaacttcagGGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTC
EST: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAG GGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTCEST: gi|74232046|gb|DT639960.1|DT639960
genomic: TGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAGgtattgtaat ... ggaacttcagGGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTC
EST: AGAAGACTGTCACTGTTCTCAG GGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTC
genomic: AGAAGACTGTCACTGTACTCAGgtattgtaat ... ggaacttcagGGAGTGTATTCTTTTGATGAGAAGGCACGCTCAATCCAGGTGGATACATTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| AAACTTCGATCCAGTTCGCTACTCTGGTAGATGGTTTGAGGTAGCCTCGTTGAAACGTGGATTTGCTGGTCAGGGACAAGAAGACTGTCACTGTACTCAGgtattgtaatacctgaaacatcaaacacattggagaggatatctgtagccaggatttttctccattatctaaaaaagaacatctctgtctgtgtgatgat
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -aaaaagaa