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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

TAATTCCGGCGGAGCAAAAGTTTCTGAAAGTTCGGATATAGTTACATTTGCTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgtatggatcctacagtttgacagtagcacttgcagcaatcaaataagggaaataagctggtccatacatattttttgttcag

Basic information

species Zea mays
transcript GRMZM2G072865_T02
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G072865_T02 (Zea mays), 5'ss of exon 3
lower sequence: LOC_Os02g43350.1 (Oryza sativa), 5'ss of exon 3
TAATTCCGGCGGAGCAAAAGTTTCTGAAAGTTCGGATATAGTTACATTTGCTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatg-gtcgtatg---gatcctac----------agtttgacagtagcact-tgc---agcaatcaaat-aagggaaataagctggtc-catacatattttttgttcag
 || || || || || |||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||| ||  ||||    ||  |||          ||||   || |   | | |||   | |  |  | |  |||| |||||||| ||   ||    || || |||||||
AAACTCTGGTGGGGCCAAAGTTTCAGAAAGTACCGATATAGTTACATTTGCTGATGTGGCTGGAGTAGATGAGGCCAAAGAAGAGCTGGAAGAGATTGTGgtatgtgttttatgctcaatgttactggtatatgcagttatccactgatattatgccttatctgttgactcgaggggaataagctagttatatcttaatcttatgttcag

upper sequence: GRMZM2G072865_T02 (Zea mays), 5'ss of exon 3
lower sequence: Vv06s0004g06120.t01 (Vitis vinifera), 5'ss of exon 3
TAATTCCGGCGGAGCAAAAGTTTCTGAAAGTTCGGATATAGTTACATTTGCTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcg-----------tatggatcctacagtttga--cagtagcacttgcagcaatcaaataagggaaataagctggtccat-acatattttttgttcag-----------------
|  ||| || ||| | |||||   ||||     ||| | |||||| ||||||||||| || || || |||||||| || || ||||| ||||||||||| ||||| | |           |||  ||  |||   |||   || ||    |    | |||||  ||| |||  |   ||  || || | |   | ||| | ||                  
TGCTTCTGGTGGAACTAAAGTCAATGAACAAGGGGAAACAGTTACCTTTGCTGATGTTGCAGGTGTTGATGAGGCTAAGGAGGAGCTAGAAGAAATTGTAgtatgttagacattcctcaatattaattttacttcttggatcattaaatttctggggaatca--taaaggatttctactcttcgatgaaacggtctttatgcactgatgtttattggccag

upper sequence: GRMZM2G072865_T02 (Zea mays), 5'ss of exon 3
lower sequence: PP1S10_296V6.1 (Physcomitrella patens), 5'ss of exon 6
TAATTCCGGCGGAGCAAAAGTTTCTGAAAGTTCGGA-TATAGTTACATTTGCTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgtatggatcctacagtttgac----agtagc--acttgcagcaatcaaataagggaaataagctggtccatacatattttttgttcag-----
 | |  |||  |     |||  ||     ||| ||  |  | |||  ||||| ||||| || || || || || |||||||||||||||||||||||||| |||  ||      |   | | | ||   |    |  |||  | |   | |  |   |     |   || |    | |||  |     |   |||       
-ATTATCGGGAGGTGGCAAGGATCAAGGTGTTGGGGGTCCAATTATGTTTGCGGATGTTGCAGGTGTGGACGAAGCAAAAGAAGAGCTTGAAGAAATTGTTgta-agtgaagcagcaaccaaaattaagcctcaaacagccaagtctgatcttttgcacgcatgctctacgtatcttcatctaaggagtaaattcgttagtg

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|32926057|gb|CF030869.1|CF030869
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32926564|gb|CF031376.1|CF031376
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGC
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGC
EST: gi|32925893|gb|CF030705.1|CF030705
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32926389|gb|CF031201.1|CF031201
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32920740|gb|CF025552.1|CF025552
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32925408|gb|CF030220.1|CF030220
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32925354|gb|CF030166.1|CF030166
EST:     TTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32925076|gb|CF029888.1|CF029888
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32921801|gb|CF026613.1|CF026613
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32925574|gb|CF030386.1|CF030386
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32929777|gb|CF034589.1|CF034589
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|211013708|gb|FL252302.1|FL252302
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32925209|gb|CF030021.1|CF030021
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32926924|gb|CF031736.1|CF031736
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32926579|gb|CF031391.1|CF031391
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTC
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTC
EST: gi|32921452|gb|CF026264.1|CF026264
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32924865|gb|CF029677.1|CF029677
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|211013709|gb|FL252303.1|FL252303
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32925973|gb|CF030785.1|CF030785
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATAT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATAT
EST: gi|32925993|gb|CF030805.1|CF030805
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32925153|gb|CF029965.1|CF029965
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32926414|gb|CF031226.1|CF031226
EST:     CTGATGTGGCTGGAGTAGATGAGACAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32925765|gb|CF030577.1|CF030577
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32925463|gb|CF030275.1|CF030275
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32926327|gb|CF031139.1|CF031139
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32926844|gb|CF031656.1|CF031656
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCT
EST: gi|32926278|gb|CF031090.1|CF031090
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTC
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTC
EST: gi|32921284|gb|CF026096.1|CF026096
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGACATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32925438|gb|CF030250.1|CF030250
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32929308|gb|CF034120.1|CF034120
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32926859|gb|CF031671.1|CF031671
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGGTCTTAAGGAACCCAGAAAGATATATTCGGTCTCGGTGCTCGCCCTCC
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCG-TCTCGGTGCTCGCCCTCC
EST: gi|32929127|gb|CF033939.1|CF033939
EST:     CTGATGTGGCTGGAGTAGATGGGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32925831|gb|CF030643.1|CF030643
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
EST: gi|32926839|gb|CF031651.1|CF031651
EST:     CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTG                         GAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT
genomic: CTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgt ... ttttgttcagGAGTTCTTAAGGAACCCAGAAAGATATATTCGTCTCGGTGCTCGCCCTCCT

Putative cis-regulatory sequences

 atgc intron ATGC exonic elements by Pertea et al.
 ATGC exon atgc putative intronic elements
 ATGC putative exonic elements identified for retained introns
        10        20        30        40        50        60        70        80        90        100       110       120       130       140       150       160       170       180       190       200       210       220 
---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| 
TAATTCCGGCGGAGCAAAAGTTTCTGAAAGTTCGGATATAGTTACATTTGCTGATGTGGCTGGAGTAGATGAGGCAAAAGAAGAGCTTGAAGAAATTGTGgtatggtcgtatggatcctacagtttgacagtagcacttgcagcaatcaaataagggaaataagctggtccatacatattttttgttcag

- - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AAAGAA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AGAGCT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GAGCTT
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - TTGAAG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  TGAAGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -  AAGAAA