1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' |
CTGCTAGAAGATTTAGGCGTGGTCCCCATACCGAGTACATTATATCTCTTGATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttcaacatgattccagagttctcctgaaccttcttggattacctatgcttatgaattggttgctgaaagtgacgtgttctggtgtgattaggtg...
species | Zea mays |
transcript | GRMZM2G068586_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|32837698|gb|CD977376.1|CD977376
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|148950368|gb|EC895931.2|EC895931
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|78078969|gb|DV507381.1|DV507381
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|78078970|gb|DV507382.1|DV507382
genomic: GCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|149111829|gb|EE190984.2|EE190984
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|71310923|gb|DR791764.1|DR791764
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|76914172|gb|DV165433.1|DV165433
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|32837169|gb|CD976847.1|CD976847
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|32837066|gb|CD976744.1|CD976744
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|20803223|gb|BQ294273.1|BQ294273
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|67022110|gb|CO450859.1|CO450859
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|32837434|gb|CD977112.1|CD977112
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|32837185|gb|CD976863.1|CD976863
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATAEST: gi|32833718|gb|CD973396.1|CD973396
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
EST: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAG ATCTGATTTCTGGGGGACAAACTTCANAATATATGATAGCAAGCCACCATA
genomic: GATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttca ... ccttgtttagATCTGATTTCTGGGGGACAAACTTCAAAATATATGATAGCAAGCCACCATA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| CTGCTAGAAGATTTAGGCGTGGTCCCCATACCGAGTACATTATATCTCTTGATGCAGAAGACTTATCACAAGGGAGCAATGCATACATGGGGAAACTGAGgtgaggttcaacatgattccagagttctcctgaaccttcttggattacctatgcttatgaattggttgctgaaagtgacgtgttctggtgtgattaggtg
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GGAGCA