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Data associated with selected splice site

Sequence

 atgc   intronic sequence     ATGC   exonic sequence

GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctgatccttcctttactttggcgttgattcagtttcatagttctagctagcaacatctctttgatcccaatatgctgttgtcaactgtttatc...

Basic information

species Zea mays
transcript GRMZM2G067985_T02
intron # 3
splice site 5'
intron type U2

Orthologous splice sites


 atgc   intronic sequence     ATGC   exonic sequence


upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: LOC_Os05g01600.2 (Oryza sativa), 5'ss of exon 3
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctgatccttcctttactttggcgttgattcagtttcatagttctagctagcaacatctctttgatcccaatatgctgttgtcaactgtttatc---
|||||||||||||| ||||||||||||||||||||||| ||||| ||||| || || ||||| || || || || |||||||| ||||| ||||||||||||||| | | || | |||| | | || | | | || | || || | | |||||| | ||||| | ||| ||| |
GAGAAGATGACCCAGATTATGTTTGAGACTTTCAATGTCCCTGCAATGTACGTCGCTATCCAGGCCGTGCTTTCCCTCTATGCCAGTGGCCGTACTACTGgtatgtatgaactcatctctgtcttttacttcaatgaggagggtttgctc-aattat--gcacttgtatgatccacctctgctgccatacacttttttttaat

upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA06G15520.2 (Glycine max), 5'ss of exon 3
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctgatccttcctttactttggcgttgattcagtttcatagttctagctagcaacatctctttgatcccaatatgctgttgtcaactgtttatc
|| || ||||||||||| ||||||||||| |||||||| |||||||||||||| || ||||| || || || || || ||||| ||||| || || |||||| || || || || | | | || ||||| | | | | | | ||| |||| | ||| | | |||
GAAAAAATGACCCAAATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAGGCTGTCCTCTCCCTATATGCAAGTGGTCGCACAACTGgtttgtacttat-------ttccatctgtcttaattcactcctttgtcttcacattgttctatcc--ttgaatcaaatctttttgaatcag---------

upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA08G19420.1 (Glycine max), 5'ss of exon 3
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctgatcctt--cctttactttggcgttgattcagtttcatagttctagctagcaacatctctttgatcccaatatgctgttgtcaactgtttatc
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || || || | || || ||||| ||||| | ||||| ||| || | || ||| ||| | | | | | | || | | | || ||| || ||| | |||| | |
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTGCCTGCCATGTATGTTGCAATTCAGGCTGTCTTGTCTCTGTATGCCAGTGGAAGAACTACAGgtttgtttctgtgattgatcttggatttaccaattttactatactgtggtcat-gtgatttcaattggattgggccagttatttgaataaatgctgtatgt-

upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA05G32220.1 (Glycine max), 5'ss of exon 2
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatg-acctgatccttcctttactttggcgttgattcagtttcatagttctagctagcaac--atctctttgatcccaatatgctgttgtcaactgtttatc
|| |||||||||||||| ||||||||||| |||||||| |||||||||||||| || ||||| || ||||| || | ||||| ||||| || || |||||| || | | | | | | | || | | | | ||| |||| | || || |||| | ||
GAAAAGATGACCCAAATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAGGCTGTTCTCTCCTTGTATGCCAGTGGTCGCACAACTGgtttgtatattaccatctgtcttgattcattcttttataatcacatcattctttccctgaatcaattcctttcaaaacag-----------------------

upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA15G05570.1 (Glycine max), 5'ss of exon 3
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctgatccttcctttactttggcgttgattcagtttcatagttctagctagcaacatctctttgatcccaatatgctgttgtc--aactgtttatc---
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || || || | || || ||||| ||||| |||||||| ||| || | || || | | | || | | | ||| | | | || || ||| | | || || | | ||
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTGCCTGCCATGTATGTTGCAATTCAGGCTGTCTTGTCTCTGTATGCCAGTGGACGTACTACAGgt-----ttgtttctgtgattgatcttggatttactatttactataccgtggacatgtgatttcaattggattaggtcagcttattatctgagcaaattcctgta

upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA08G15480.1 (Glycine max), 5'ss of exon 3
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatg-acctgatccttcctttactttggcgttgattcagtttcatagttctagctagcaac--atctctttgatcccaatatgctgttgtcaactgtttatc
|| |||||||||||||| ||||||||||| |||||||| |||||||||||||| || ||||| || ||||| || | ||||| ||||| || || |||||| || | | | | | | | || | | | | ||| ||||| | || || |||| | ||
GAAAAGATGACCCAAATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAGGCTGTTCTCTCCTTGTATGCAAGTGGTCGCACAACTGgtttgtatatcaccatctgtcttgattcattcttttataatcacattgttctttccctgaatcaattccttttaaaacag-----------------------

upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: GLYMA04G39380.2 (Glycine max), 5'ss of exon 3
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctgatccttcctttactttggcgttgattcagtttcatagttctagctagcaacatctctttgatcccaatatgctgttgtcaactgtttatc
|| || ||||||||||| ||||||||||| |||||||| |||||||||||||| || |||||||| || || || || ||||| ||||| || || |||||| || | | | | | | || || || ||||| | | | | || ||| | |||| | | ||| |
GAAAAAATGACCCAAATCATGTTTGAGACCTTCAATGTGCCTGCCATGTATGTGGCCATCCAAGCTGTCCTCTCCCTATATGCAAGTGGTCGCACAACTGgtttgtatttgta-tccatctgtttcaa--ttcat--agttttgtcatcaca----ttgttctttccctgaatcaaatactttctga--aacag------

upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: AT1G49240.1 (Arabidopsis thaliana), 5'ss of exon 3
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacc--tgatccttcctttactttggcgttgattcagtttcatagttctagctagcaacatctctttgatcccaatatgctgttgtcaactgtttatc
||||||||||| || || ||||||||||| || ||| ||| || ||||||||||| || ||||| ||||||||||| || || ||||| ||||| || ||| | | | | | | | || || |||| | || || | | || |||||| || | || | | |
GAGAAGATGACTCAGATCATGTTTGAGACCTTTAATTCTCCAGCTATGTATGTTGCCATTCAAGCTGTTCTATCACTTTACGCCAGTGGTCGTACAACCGgttagttcattattaatgtcgagaaaatgaacaaagttttgttttctgtttttaa-tgattatgtcatattgatcacagtgaaatgattttctttag-----

upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: AT5G09810.1 (Arabidopsis thaliana), 5'ss of exon 3
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctgatccttcctttactttggcgttgattcagtttcatagttctagctagcaacatctctttgatcccaatatgctgttgtcaactgtttatc
||||||||||| || || ||||||||||| |||||||| ||||||||||||||||| || || || ||||| || |||||||| ||||| ||||| || ||| | || | | || || | || | |||| || | || || || | || | | | | | |||| ||| |
GAGAAGATGACTCAGATCATGTTTGAGACATTCAATGTCCCTGCCATGTATGTTGCCATTCAGGCCGTTCTTTCTCTCTATGCCAGTGGTCGTACAACCGgttagttcttaact---ctaaacatccaagt---ctgagttatattat-cttcttacttgtatttacttaaagtcgttctctttttgt-aacag------

upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: Vv04s0044g00580.t01 (Vitis vinifera), 5'ss of exon 4
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctgatccttcctttactttggcgttgattcagtttcatagttctagctagcaacatctctttgatcccaatatgctgttgtcaactgtttatc
|| |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| || || || ||||| || || ||||| ||||||||||| |||||| | | | | ||| |||| || |||| ||| | || | | | | | | | | || |||| | | |||
GAAAAGATGACTCAAATCATGTTTGAGACTTTTAATGTGCCTGCCATGTATGTTGCCATTCAGGCTGTTCTTTCTCTATATGCCAGTGGGCGTACAACTGgttcgtattaaaa-tctttttggattggaatt--ttcatttttct--tttctgttgttagtgtagcctgagttctaacttgctcct-ttgactag-----

upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: Vv12s0178g00200.t01 (Vitis vinifera), 5'ss of exon 2
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatg-acctgatccttcctttactttggcgttgattcagtttcatagttctagctagcaacatctctttgatcccaatatgct---gttgtcaactgtttatc
||||| |||||||| |||||||||||||| ||||| || ||||||||||||||||| |||||||| || || || || ||||| ||||| ||||| || ||| || | | | | | | | | | | | | || | | | || ||| || | ||| || || | | ||
GAGAAAATGACCCAGATTATGTTTGAGACCTTCAACGTACCTGCCATGTATGTTGCTATCCAAGCTGTGCTGTCTCTGTATGCCAGTGGTCGTACAACAGgtttgtgtcaaagcactgcaagttgtagaagcaaaatacaagacctttttgtgtgtgtgtgtgtgtcattgttcatattattcttgaaccgttagccatt----

upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: EFJ17401 (Selaginella moellendorffii), 5'ss of exon 2
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatga-----cctgatccttcctttactttggc-------gttgattca-gtttcatagttcta--gctagcaacatctctttgatcccaatatgctgttgtcaactgtttatc------------------------------------
|||||||||||||| || ||||| ||||| |||||||| || |||||||| || || ||||||||||| || |||||||| || ||||| || ||||| |||||| | |||| | || | | | |||||| | ||||| | | ||| || | | | ||| || | | ||||| ||
GAGAAGATGACCCAGATCATGTTCGAGACCTTCAATGTCCCGGCCATGTACGTGGCGATCCAAGCAGTCCTTTCACTCTACGCGAGTGGACGCACTACCGgtatggagtttttttatcccttgcttgttctagacaagatggttgatgcgtgtttcttttcttcgttgcttgcgatagacatgatgcttcaagttggttctactt-ttgtttttccctctaacacgttgtatgatcgtggtttgtgatcag

upper sequence: GRMZM2G067985_T03 (Zea mays), 5'ss of exon 2
lower sequence: EFJ35077 (Selaginella moellendorffii), 5'ss of exon 2
GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatga--cctgatccttcctttactttggc-----------gttgattca-gtttcatagttcta--gctagcaacatctctttgatcccaatatgctgttgtcaactgtttatc------------------------------------
|||||||||||||| || ||||| ||||| |||||||| || |||||||| || |||||||||||||| || |||||||| || ||||| || ||||| |||||| | | ||||||| ||| | |||||| | ||||| | | ||| || | | | ||| || | | | || ||
GAGAAGATGACCCAGATCATGTTCGAGACCTTCAATGTCCCGGCCATGTACGTGGCAATCCAAGCAGTCCTTTCACTCTACGCGAGTGGACGCACTACCGgtatggagttttttttttcctttgcttgttctagacaagatggttgatgcgtgtttcttttcttcgttgcttgcgatagacatgatgcttcaagttggttctacttttttttcttctctctaacacgttgtatgatcgtggtttgtgatcag

Mapped EST sequences

Showing partial alignments of ESTs and genomic sequences. See full alignments


 ATGC     EST sequence
 ATGC     genomic sequence (exon)
 ATGC     genomic sequence (truncated intron)


EST: gi|211471833|gb|FL184449.1|FL184449
EST:     TATGCTAGTGGGCGTACTACTG                         GTATTGTTC-TTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
genomic: TATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
EST: gi|31355571|gb|CD439928.1|CD439928
EST:     TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTG                         GTATTGTTCTT-GACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
genomic: TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
EST: gi|211469310|gb|FL184438.1|FL184438
EST:     TATGCTAGTGGGCGTACTACTG                         GTATTGTTC-TTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
genomic: TATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
EST: gi|87156786|gb|DY401575.1|DY401575
EST:     TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTG                         GTATTGTTCTT-GACTCTGGTGATGGTGTGAGCCACACTGTGCCCCTTTTA
genomic: TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTT-A
EST: gi|23199688|gb|BU582253.1|BU582253
EST:     TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTG                         GTATTGTTCTT-GACTCTGGTGATGGTGTGAGCCACACTGTGC
genomic: TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGC
EST: gi|67031467|gb|CO460216.1|CO460216
EST:     TGTTGCAATCCAAGCAGTGCTCTCACTCTATGCTAGTGGGCGTACTACTG                         GTATTGTTC-TTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
genomic: TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
EST: gi|211466785|gb|FL184425.1|FL184425
EST:     TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTG                         GTATTGTTCTT-GACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
genomic: TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
EST: gi|5325045|gb|AI783236.1|AI783236
EST:     GCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTG                         GTATTGTTC-TTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
genomic: GCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
EST: gi|211466786|gb|FL184426.1|FL184426
EST:     TATGCTAGTGGGCGTACTACTG                         GTATTGTTC-TTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
genomic: TATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
EST: gi|32850906|gb|CD990587.1|CD990587
EST:     TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTG                         GTATTGTTCTT-GACTCTG
genomic: TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTG
EST: gi|211471834|gb|FL184450.1|FL184450
EST:     TATGCTAGTGGGCGTACTACTG                         GTATTGTTC-TTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
genomic: TATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
EST: gi|5846857|gb|AI999940.1|AI999940
EST:     GCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTG                         GTATTGNTC-TTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
genomic: GCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
EST: gi|116815584|gb|EC858264.1|EC858264
EST:     TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTG                         GTATTGTTC-TTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
genomic: TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
EST: gi|62550511|gb|DN830931.1|DN830931
EST:     GTGGGCGTACTGCTG                         GTATTGTTC-TTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
genomic: GTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
EST: gi|23357518|gb|BU645167.1|BU645167
EST:     TGGTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTG                         GGATTGGTC-TTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
genomic: TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC
EST: gi|193502480|gb|AM937802.1|AM937802
EST:     TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTG                         GTATTGTTCTT-GACTCTGGTGATGGTGTGAGCCACACTGTGACCATTTAC
genomic: TGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTAC

RNA-Seq data


 ATGC   Supported by RNA-Seq exonic block that spans over the splice site

 atgs   Truncated intron sequence

Each block is as long as the maximal overhang of any read spanning the junction.
The score is the number of alignments spanning the junction.


Found data for 4 RNA-Seq libraries.


Block sizes: 49 (upstream exon), 11 (downstream exon)
Score: 185

GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTACGAAGGATATGCCCTTCCTCATGCCATTCTTCGTTTGGATCTTGCTGGTC


Block sizes: 49 (upstream exon), 11 (downstream exon)
Score: 204

GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTACGAAGGATATGCCCTTCCTCATGCCATTCTTCGTTTGGATCTTGCTGGTC


Block sizes: 49 (upstream exon), 11 (downstream exon)
Score: 132

GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTACGAAGGATATGCCCTTCCTCATGCCATTCTTCGTTTGGATCTTGCTGGTC


Block sizes: 49 (upstream exon), 11 (downstream exon)
Score: 115

GAGAAGATGACCCAAATTATGTTTGAGACTTTCAATGTTCCTGCCATGTATGTTGCAATCCAAGCAGTTCTATCACTCTATGCTAGTGGGCGTACTACTGgtatgacctg ... caatcttcagGTATTGTTCTTTGACTCTGGTGATGGTGTGAGCCACACTGTGCCCATTTACGAAGGATATGCCCTTCCTCATGCCATTCTTCGTTTGGATCTTGCTGGTC