1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' |
TGGACGGGCTCCTGGGCCCGTACTGGAAGGCGGCCGGGCTGGCGTTCAACTGCACGTTCCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAGgtgagtcaggtttcttttctttttcttttctttgcctcccatctctgcatatactagtagagtggcaatggcactggcacgcag
species | Zea mays |
transcript | GRMZM2G067022_T02 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: CCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAG CAACATCTACTACATCAACGACCGGCTGGACAAGCGGACGTGGACGTACATEST: gi|26559840|gb|CA832075.1|CA832075
genomic: CCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAGgtgagtcagg ... tggcacgcagCAACATCTACTACATCAACGACCGGCTGGACAAGCGGACGTGGACGTACAT
EST: TGATCGCCTGCGCAAG CAACATCTACTACATCAACGACCGGCTGGACAAGCGGACGTGGACGTACATEST: gi|78087017|gb|DV515410.1|DV515410
genomic: TGATCGCCTGCGCAAGgtgagtcagg ... tggcacgcagCAACATCTACTACATCAACGACCGGCTGGACAAGCGGACGTGGACGTACAT
EST: TGCACGTTCCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAG CAACATCTACTACATCAACGACCGGCTGGACAAGCGGACGTGGACGTACATEST: gi|91870569|gb|EB400953.1|EB400953
genomic: TGCACGTTCCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAGgtgagtcagg ... tggcacgcagCAACATCTACTACATCAACGACCGGCTGGACAAGCGGACGTGGACGTACAT
EST: TGCACGTTCCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAG CAACATCTACTACATCAACGACCGGCTGGACAAGCGGACGTGGACGTACATEST: gi|78111088|gb|DV529485.1|DV529485
genomic: TGCACGTTCCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAGgtgagtcagg ... tggcacgcagCAACATCTACTACATCAACGACCGGCTGGACAAGCGGACGTGGACGTACAT
EST: TGCACGTTCCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAG CAACATCTACTACATCAACGACCGGCTGGACAAGCGGACGTGGACGTACATEST: gi|91871140|gb|EB401266.1|EB401266
genomic: TGCACGTTCCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAGgtgagtcagg ... tggcacgcagCAACATCTACTACATCAACGACCGGCTGGACAAGCGGACGTGGACGTACAT
EST: TGCACGTTCCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAG CAACATCTACTACATCAACGACCGGCTGGACAAGCGGACGTGGACGTACATEST: gi|93014357|gb|EB639877.1|EB639877
genomic: TGCACGTTCCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAGgtgagtcagg ... tggcacgcagCAACATCTACTACATCAACGACCGGCTGGACAAGCGGACGTGGACGTACAT
EST: TGCACGTTCCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAG CAACATCTACTACATCAACGACCGGGCTGGACAAGCGGACGTGGACGTACA
genomic: TGCACGTTCCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAGgtgagtcagg ... tggcacgcagCAACATCTACTACATCAACGACCGG-CTGGACAAGCGGACGTGGACGTACA
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TGGACGGGCTCCTGGGCCCGTACTGGAAGGCGGCCGGGCTGGCGTTCAACTGCACGTTCCTGCTCTTCGGCACGGTCATCCAGCTGATCGCCTGCGCAAGgtgagtcaggtttcttttctttttcttttctttgcctcccatctctgcatatactagtagagtggcaatggcactggcacgcag
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - CAGCTG
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - AGCTGA
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - GCTGAT