1 5' 3' | 2 5' 3' | 3 5' 3' | 4 5' 3' | 5 5' 3' | 6 5' 3' | 7 5' 3' |
TTTTGATTCAAGAACTGTCATGGGATTTGGAGTACTTAATGGAATCTCCATTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAGgtatagacatatcttaatgtagtacttgtaccattcagaatttcttagatatttcactctggtcctgcaattatcacgggtctgttactgcaccagtaat...
species | Zea mays |
transcript | GRMZM2G063511_T01 |
intron # | 3 |
splice site | 5' |
intron type | U2 |
EST: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAG ATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTCEST: gi|148991668|gb|EE033210.2|EE033210
genomic: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAGgtatagacat ... ttatatctagATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTC
EST: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAG ATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTCEST: gi|71303455|gb|DR787837.1|DR787837
genomic: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAGgtatagacat ... ttatatctagATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTC
EST: TTGGGCTCCTCAACTTGAGTCTTGGCTTCCACTCTGTTGGGTTTTACCAG ATGACTAAGCTGGCGATCATCCEST: gi|148934066|gb|EC878080.2|EC878080
genomic: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAGgtatagacat ... ttatatctagATGACTAAGCTGGCGATCATCC
EST: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAG ATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTCEST: gi|74238674|gb|DT646588.1|DT646588
genomic: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAGgtatagacat ... ttatatctagATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTC
EST: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAG ATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTCEST: gi|76281072|gb|DV020640.1|DV020640
genomic: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAGgtatagacat ... ttatatctagATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTC
EST: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAG ATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTCEST: gi|71770743|gb|DR968680.1|DR968680
genomic: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAGgtatagacat ... ttatatctagATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTC
EST: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAG ATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTCEST: gi|71444391|gb|DR825441.1|DR825441
genomic: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAGgtatagacat ... ttatatctagATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTC
EST: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAG ATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTC
genomic: TTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAGgtatagacat ... ttatatctagATGACTAAGCTGGCGATCATCCCGTGCACTGTCATCTTAGAGACACTTTTC
atgc | intron | ATGC | exonic elements by Pertea et al. |
ATGC | exon | atgc | putative intronic elements |
ATGC | putative exonic elements identified for retained introns |
10 20 30 40 50 60 70 80 90 100 110 120 130 140 150 160 170 180 190 200 210 220 ---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------|---------| TTTTGATTCAAGAACTGTCATGGGATTTGGAGTACTTAATGGAATCTCCATTGGGCTCCTCAACTTGAGTCTTGGCTTCAACTCTGTTGGGTTTTACCAGgtatagacatatcttaatgtagtacttgtaccattcagaatttcttagatatttcactctggtcctgcaattatcacgggtctgttactgcaccagtaat
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